Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq349 280 1e-70 >seq349 Length=550016 Score = 280 bits (310), Expect = 1e-70 Identities = 558/821 (68%), Gaps = 4/821 (0%) Strand=Plus/Minus Query 12859 TTTTTGATATTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATATT 12918 ||| || || |||| ||| | || || || ||||| ||||| || || |||||| | Sbjct 192960 TTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCATCAGTGGAAATAAT 192901 Query 12919 TTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACACCCTAATTCTAGTAA 12978 ||| |||||||||||||| | || ||| |||| ||| || | ||| ||||| Sbjct 192900 GGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACAACCGAGTTC-AGTAA 192842 Query 12979 -CAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTA 13037 ||| ||||| || ||||| || || ||||| ||| | | || |||||||| || | Sbjct 192841 GCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAATTCATTCCAATGA 192782 Query 13038 ATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACTA 13097 |||| || | || || | | ||| | || ||| ||| |||| || || || || Sbjct 192781 GGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACAGCATCTCGAATTA 192722 Query 13098 TGTCTCTTATTACGTTCTCTA-ATGGAGGATTTGATAGATGCTTAAACATCATACATGCA 13156 | || | | || || || | || | | |||| | |||| | || ||| Sbjct 192721 TACCTACGACT-CGATCCTTAGACGGTTTCTGTACGAGATACGAGAACAGTAGGCAAGCA 192663 Query 13157 AAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGC 13216 || || || || || |||||||||||| || | || || || ||||||| || ||| Sbjct 192662 AAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAGAATGTTAAGCCAGGC 192603 Query 13217 ATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCT 13276 || | ||||||||||| | ||| |||||||| || || || || |||||||| ||| Sbjct 192602 ATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCAGAGAAAAATATACCT 192543 Query 13277 TCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCCAC 13336 || || ||||| || || || | |||||| || | |||||| | || | |||||| Sbjct 192542 TCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACTCTTCGAGTTTATCCAG 192483 Query 13337 TTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGCGTTAAATAAA 13396 ||| ||||| | || || | ||| || || | || || || || || | Sbjct 192482 TTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTCTCAATAGCATTGAAAAGG 192423 Query 13397 TAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAA 13456 | | ||||| ||| || ||||||||| || ||||| | ||| |||||||||||| Sbjct 192422 AAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAACATGCTGTACATTTCTGAA 192363 Query 13457 TGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACT 13516 || ||||| || || |||||||||||||||||||| || | ||||||| |||||||||| Sbjct 192362 TGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGTGCCTCTGTTACCTGAACT 192303 Query 13517 TCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaa 13576 || | ||||||||| ||| || || || ||||| || || |||||| ||||| Sbjct 192302 TCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCATCGGAAGCAGCGAAAAAC 192243 Query 13577 GCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACAACTTTAACCAATCTGGAAAA 13636 || || | ||| || || | ||||||| || || | ||| ||| | | | Sbjct 192242 GCGAGAACGTGTGATATGAAATGCCTTTCGTTATCAGAAAGTCTTACCCAGTGATCCATA 192183 Query 13637 TCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGC 13677 || || |||||||| || ||||| ||||||||| ||||| Sbjct 192182 TCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAATGAAGC 192142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430927384288548