Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq349 228 2e-54 seq365 172 1e-37 seq38 158 3e-33 seq747 152 1e-31 seq233 98.7 2e-15 >seq349 Length=550016 Score = 228 bits (252), Expect = 2e-54 Identities = 482/705 (68%), Gaps = 38/705 (5%) Strand=Plus/Plus Query 268691 AACCCAGATAGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGGATGTACAAA 268750 ||||||| | ||||| ||||| || || ||| | ||||| ||| | |||||| Sbjct 192073 AACCCAGGACGCTTTGTTATATTCCCCATCCAGTACCCCGATATTTGGGCCAAATACAAA 192132 Query 268751 CAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGACTTAATAGAT 268810 | |||| ||||| |||||||| ||| ||||| ||| | ||| | || || ||| Sbjct 192133 GAAGCCGAAGCTTCATTTTGGACCACAGAGGAAGTGGATTTATCTAAGGAT---ATGGAT 192189 Query 268811 ---TGG--AAAAATTT---AAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCGT 268862 ||| || | ||| | ||| ||||| || ||||| | |||| |||| Sbjct 192190 CACTGGGTAAGACTTTCTGATAAC-----GAAAGGCATTTCATATCACACGTTCTCGCGT 192244 Query 268863 TTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAGG 268922 |||| || | | ||||| || || || || ||||||||||| | ||| | ||||| | Sbjct 192245 TTTTCGCTGCTTCCGATGGAATAGTAAATGAGAATCTAGTAGAAAGATTCAGCCAAGAAG 192304 Query 268923 TACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCATT 268982 | ||| | | || || | || ||||| || ||||| |||||||| || ||||| |||| Sbjct 192305 TTCAGGTAACAGAGGCACGTTGCTTTTATGGTTTCCAAATAGCTATCGAGAATATCCATT 192364 Query 268983 CAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGAC 269042 |||| |||||||| | || || || |||||||| ||| | ||| ||||||| Sbjct 192365 CAGAAATGTACAGCATGTTGATCGAAACTTATATTACCGATC----CTAAACAAAAAGAC 192420 Query 269043 TA--TTTTC--TTCTAT-GAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCT 269097 | ||||| | |||| |||| | || ||||| | || || |||| |||||| | Sbjct 192421 TTCCTTTTCAATGCTATTGAGACCC-TGCCTTGTGTTCGTAAGAAGGCTGATTGGGCTTT 192479 Query 269098 GAAATGGATAAACG---ATAGCGCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGT 269154 || ||||||||| | || | | ||| |||||| | | || || || || || Sbjct 192480 AAACTGGATAAACTCGAAGAGTAGTACATTCGGGGAAAGGATCATCGCCTTCGCAGCGGT 192539 Query 269155 AGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCT 269214 |||||||||||| || || || || || ||||| || ||| | || ||| ||||| | Sbjct 192540 AGAAGGTATATTTTTCTCTGGCAGCTTCGCGGCTATATTCTGGCTAAAAAAACGAGGCTT 192599 Query 269215 TATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGA 269274 ||||| || ||||| |||||||| |||||||| || || ||||| ||||| ||||| Sbjct 192600 AATGCCTGGCTTAACATTCTCTAATGAATTGATCTCTAGAGATGAAGGGTTACATTGCGA 192659 Query 269275 CTTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGT-AT 269333 ||| ||||| || | || || ||||| ||| ||||| ||| | ||| |||| | Sbjct 192660 CTTTGCTTGCCTACTGTT--CT-CGTATCTCGTACAGAAACCGTCTAAGGATCGAGTCGT 192716 Query 269334 ACG--AAATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCT 269376 | | |||| |||| |||||| || | ||| ||||||||| Sbjct 192717 AGGTATAATTCGAGAT---GCTGTTGCTATCGAACAAGAATTTCT 192758 >seq365 Length=450407 Score = 172 bits (190), Expect = 1e-37 Identities = 166/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 104351 ACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCT 104410 || ||||| | || ||||| |||||||| |||||||| |||| || | || |||||| Sbjct 426483 ACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGATAAGGTACGTCCATCTTCT 426424 Query 104411 AGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGA 104470 | ||||| ||||| |||||||| | || |||||||| || || |||||||| || || Sbjct 426423 AACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGGATACCTTCTTTGTCTTGG 426364 Query 104471 ATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTA 104530 ||||||||||| ||||| || | |||||| ||||| ||||| || || || |||||| Sbjct 426363 ATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACCTCAAGGGTGATGGTCTTA 426304 Query 104531 CCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 || || | ||||||||||| |||||||| ||| Sbjct 426303 CCTGTCAAAGTTTTTACAAAAATCTGCATGTTG 426271 >seq38 Length=2283748 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||||||||||||||||||||| || ||||| | ||| |||||||| ||||| || Sbjct 1208932 GTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTCTAGCTGTTTGCCG 1208873 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 |||||||| || | || || || || || || |||||||| || ||||| || || || Sbjct 1208872 GCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTGAATTTTGGCCTTC 1208813 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||| | |||||| ||||| ||||| | || || ||||| || || | ||| Sbjct 1208812 ACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTCTTGCCCGTCAAGGTT 1208753 Query 104543 TTTACAAATATCTGCAT 104559 |||||||| |||||||| Sbjct 1208752 TTTACAAAGATCTGCAT 1208736 Score = 116 bits (128), Expect = 9e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 |||||||| ||||| ||||||||||| || || || | || |||||||| || || || Sbjct 1208704 GTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTGCGTCCATCTTCTAGCTGCTTGCCG 1208645 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | || ||||| ||||| || |||||||| || || || || || || Sbjct 1208644 GCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTGGATTTTGGCCTTG 1208585 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||| || ||||| || || | || || || || || || | ||| Sbjct 1208584 ACATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTTTTCCCCGTCAAGGTT 1208525 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 1208524 TTCACGAAGATCTGCAT 1208508 >seq747 Length=644639 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| || || ||||| |||||||| ||||| | || ||||| |||||||| || Sbjct 462522 GTTGATTCCTTTTGGATATTGTAGTCAGAAAGAGTACGTCCATCTTCAAGTTGTTTGCCT 462581 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||||||||||||||| || || ||||| ||||| || || ||||| Sbjct 462582 GCGAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCTTTGTCCTGGATTTTAGCTTTA 462641 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||||| || || ||| || |||||||| || ||||| ||||| || || ||| Sbjct 462642 ACGTTTTCTATTGTGTCAGAAGGCTCGACCTCTAGCGTGATAGTTTTACCCGTGAGGGTT 462701 Query 104543 TTTACAAATATCTGCAT 104559 ||||| || || ||||| Sbjct 462702 TTTACGAAAATTTGCAT 462718 Score = 149 bits (164), Expect = 1e-30 Identities = 151/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| || || ||||| |||||||| |||| | || |||||||||||||| || Sbjct 465998 GTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGCCCATCTTCTAGTTGTTTACCC 466057 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || | | ||||||||| ||||| || |||||||| ||||| || || ||||| Sbjct 466058 GCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCTTTGTCCTGGATTTTAGCTTTA 466117 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || ||||||| | || ||| || |||||||| || || |||||||| || || ||| Sbjct 466118 ACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTGATGGTCTTACCCGTTAGGGTT 466177 Query 104543 TTTACAAATATCTGCAT 104559 ||||| || || ||||| Sbjct 466178 TTTACGAAAATTTGCAT 466194 >seq233 Length=1369072 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/215 (71%), Gaps = 4/215 (2%) Strand=Plus/Plus Query 104350 TACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTC 104409 ||| | ||| | ||||| || ||||| || | |||||||| | || | | |||| Sbjct 301373 TACCAAATGAAGAGTAGAGTCATTCTGGATGTAGTAGTCAGACAATGTGCGTTCATCTTT 301432 Query 104410 TAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTAT-TCCTTCTTTATCCT 104468 |||||||| ||||||||||| || || ||||| ||||| || ||| || || || Sbjct 301433 AAGTTGTTTACCAGCAAAAATCAGGTGTTGCTGATCTGGAGGAATCTCC--CTATA-GCT 301489 Query 104469 GAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCT 104528 | || || ||||| |||||||| | ||||| | ||| || |||| || ||||||| Sbjct 301490 GGATTTTAGCTTTCACATTTTCGATAGTATCAGATGATTCGACTTCTACCGTGATAGTCT 301549 Query 104529 TACCAGTAAGTGTTTTTACAAATATCTGCATTTTG 104563 | || || || |||||||| | || |||||| || Sbjct 301550 TTCCCGTGAGGGTTTTTACGATAATTTGCATTGTG 301584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151243884493592