Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq1106 125 4e-24 seq591 118 6e-22 seq255 118 6e-22 seq173 118 6e-22 seq1174 116 2e-21 seq507 116 2e-21 seq665 109 3e-19 seq85 109 3e-19 seq124 107 1e-18 >seq1106 Length=252916 Score = 125 bits (138), Expect = 4e-24 Identities = 82/90 (91%), Gaps = 2/90 (2%) Strand=Plus/Minus Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499 |||||||||| ||||||||||||| |||||||||| |||||||||||||||||||| Sbjct 196831 TAATAAAAAA--AAATTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCA 196774 Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||||| |||||||||||||||||||| Sbjct 196773 CGACGCTCTAACCAACTGAGCTAATGGGCC 196744 >seq591 Length=438825 Score = 118 bits (130), Expect = 6e-22 Identities = 89/105 (85%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 11430 AATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGC 11489 |||| | ||| || |||||| | ||||||||| |||||||||| |||||||||| Sbjct 389034 AATAAAAAATCAAAAAAAAAGTA---TGGCCCATGGGGGGATCGAACCCACGACCTTCGC 388978 Query 11490 GTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCCGTCGA 11534 ||||||||||||||||||| |||||||||||||||||||||| || Sbjct 388977 GTTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCCGTTGA 388933 >seq255 Length=643732 Score = 118 bits (130), Expect = 6e-22 Identities = 86/99 (87%), Gaps = 1/99 (1%) Strand=Plus/Plus Query 11431 ATATAGAATTAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCG 11490 |||| || ||| ||||||| | || |||||||| |||||||||| ||||||||||| Sbjct 161489 ATATTGATTTATTAAAAAAAAAGAT-GGCCCATGGGGGGATCGAACCCACGACCTTCGCG 161547 Query 11491 TTATTAGCACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||||||||||| |||||||||||||||||||| Sbjct 161548 TTATTAGCACGACGCTCTAACCAACTGAGCTAATGGGCC 161586 Score = 113 bits (124), Expect = 2e-20 Identities = 76/85 (89%), Gaps = 2/85 (2%) Strand=Plus/Plus Query 11445 AAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACG 11504 ||||| || |||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 159046 AAAAA--AAGTTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACG 159103 Query 11505 CTCTRACCAACTGAGCTAATGGGCC 11529 |||| |||||||||||||||||||| Sbjct 159104 CTCTAACCAACTGAGCTAATGGGCC 159128 >seq173 Length=812774 Score = 118 bits (130), Expect = 6e-22 Identities = 79/88 (90%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||||||| || |||||||||| |||||||||| |||||||||||||||||||||| Sbjct 411263 ATAAAAAAACA--TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACG 411320 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||||||||| Sbjct 411321 ACGCTCTAACCAACTGAGCTAATGGGCC 411348 >seq1174 Length=363067 Score = 116 bits (128), Expect = 2e-21 Identities = 71/76 (93%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 11454 ATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCA 11513 ||||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 35911 ATTGGCCCATGGGAGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCA 35852 Query 11514 ACTGAGCTAATGGGCC 11529 |||||||||||||||| Sbjct 35851 ACTGAGCTAATGGGCC 35836 >seq507 Length=486415 Score = 116 bits (128), Expect = 2e-21 Identities = 81/91 (89%), Gaps = 4/91 (4%) Strand=Plus/Plus Query 11441 AATAAAAAATCAAATTG--GCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGC 11498 ||||||||| |||||| ||||||| |||||||||| ||||||||||||||||||| Sbjct 472558 AATAAAAAA--AAATTGTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGC 472615 Query 11499 ACGACGCTCTRACCAACTGAGCTAATGGGCC 11529 |||||||||| |||||||||||||||||||| Sbjct 472616 ACGACGCTCTAACCAACTGAGCTAATGGGCC 472646 >seq665 Length=622555 Score = 109 bits (120), Expect = 3e-19 Identities = 68/74 (92%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515 ||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||| Sbjct 123948 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 124007 Query 11516 TGAGCTAATGGGCC 11529 |||||||||||||| Sbjct 124008 TGAGCTAATGGGCC 124021 >seq85 Length=1220989 Score = 109 bits (120), Expect = 3e-19 Identities = 76/86 (88%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503 |||||| | | ||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 811534 AAAAAAACTA--TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 811477 Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529 ||||| |||||||||||||||||||| Sbjct 811476 GCTCTAACCAACTGAGCTAATGGGCC 811451 >seq124 Length=1225349 Score = 107 bits (118), Expect = 1e-18 Identities = 76/88 (86%), Gaps = 0/88 (0%) Strand=Plus/Plus Query 11442 ATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACG 11501 |||||||| | ||||||||| |||||||||| |||| ||||||||||||||||| Sbjct 783409 ATAAAAAAAAAGTATGGCCCATGGGGGGATCGAACCCACGACTTTCGCGTTATTAGCACG 783468 Query 11502 ACGCTCTRACCAACTGAGCTAATGGGCC 11529 ||||||| |||||||||||||||||||| Sbjct 783469 ACGCTCTAACCAACTGAGCTAATGGGCC 783496 Lambda K H 0.638 0.410 0.920 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 261457820158024