Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq38 138 1e-27 seq747 122 8e-23 seq365 96.9 3e-15 >seq38 Length=2283748 Score = 138 bits (152), Expect = 1e-27 Identities = 163/219 (74%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 |||| |||||||| | |||||||||||| || | ||||| ||| | ||||| | Sbjct 1208722 CGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGG--AAAGTGTGCGTC 1208665 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| || ||||| || ||| | || || | | ||||||||| |||||||| ||||||| Sbjct 1208664 CATCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTT 1208605 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGA 94970 |||| | ||||| |||||||| ||| ||||||| | ||||| || | |||| Sbjct 1208604 TGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGA 1208545 Query 94971 TGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 ||||||| || || | |||||||| ||||||||||||| Sbjct 1208544 TGGTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCATGC 1208506 Score = 122 bits (134), Expect = 8e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 94798 CACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTC 94857 ||||||||| | || ||||| || || | ||||| ||| | |||| ||| || Sbjct 1208945 CACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTC 1208886 Query 94858 CAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATA 94917 |||||||| ||| |||| || | || |||||| ||||| ||||| ||||||||||| | Sbjct 1208885 TAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTG 1208826 Query 94918 AATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTT 94977 |||||| ||||| ||| | | ||| || | | ||||| || | |||||||| || Sbjct 1208825 AATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTCTT 1208766 Query 94978 TCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||| |||||||||||||| Sbjct 1208765 GCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 ||||||||||| || |||||||| || | ||| || || || || |||||| Sbjct 1208488 ACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCCGTCCTCC 1208429 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 | |||||| ||| | ||||| || || |||||||| ||||| || || |||||||| | Sbjct 1208428 AACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTGTCCTGG 1208369 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 || || ||||| ||| ||| ||||| | | || || || | ||||| ||||| Sbjct 1208368 ATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATAGTTTTA 1208309 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 ||||| || || ||||| ||||||||||| || Sbjct 1208308 CCAGTCAGTGTCTTCACGAAGATCTGCATTCT 1208277 Score = 114 bits (126), Expect = 1e-20 Identities = 147/201 (73%), Gaps = 4/201 (2%) Strand=Plus/Minus Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTTC 94868 || || ||||| || | |||||| ||| | || || || || |||||||| || | Sbjct 1209616 GTCGACTCCTTCTGAATGTTATAGTCGG--AAAGGGTACGACCGTCTTCCAGCTGCTTGC 1209559 Query 94869 CGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCT 94928 || ||||||| || || ||||||||||| ||||| || || ||||| | ||||| || | Sbjct 1209558 CGGCAAAGATCAACCTCTGCTGATCTGGGGGAATCCCCTCCTTGTCTTGGATTTTCGCTT 1209499 Query 94929 TGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAG 94988 | || ||| ||||||| | ||||| || | |||||||| || || || || | Sbjct 1209498 TCACATTTTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTCTTGCCGGTCAGGG 1209439 Query 94989 TTTTCACAAAGATCTGCATGC 95009 ||||||| ||||||||||||| Sbjct 1209438 TTTTCACGAAGATCTGCATGC 1209418 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 |||| |||||||| | || ||||| ||||| | || || ||| | ||| | Sbjct 1209406 CGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCA 1209347 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || ||||| || ||| |||| || | | |||||||||||| ||||| ||||||||| Sbjct 1209346 TCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTTG 1209287 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972 || | ||||| ||||| ||| | | || || | | || || || | |||||| Sbjct 1209286 TCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGTGATG 1209227 Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| || | ||||| |||||||| ||||| Sbjct 1209226 GTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858 |||||||| | || ||||| ||||| | || || || | ||| ||| || Sbjct 1209172 ACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCCATCTTCT 1209113 Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918 ||||| || ||| |||| || | | |||||| ||||| ||||| || || ||||| | Sbjct 1209112 AGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTTGTCTTGG 1209053 Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978 ||||| ||||||||| | | || || | | ||||| || | |||||||| ||| Sbjct 1209052 ATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAGAGTGATGGTCTTT 1208993 Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || || | ||||| || ||||||||||| Sbjct 1208992 CCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 >seq747 Length=644639 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || |||||||| ||||| |||||||| | ||||| ||||| || | ||| || || | Sbjct 453161 CCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 453102 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | || ||| || || ||||| || | ||||| | | |||||||||||||||| Sbjct 453101 AATGTACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGGA 453042 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || |||||||| | ||||| || || || ||| ||| |||| | ||||| Sbjct 453041 ATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGACC 452982 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||| ||||| || || || |||||||| || || ||||| Sbjct 452981 TCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCAT 452935 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || ||||| || || |||||||| | || ||||||||||| | || || || Sbjct 465968 CCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAA 466027 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 |||| ||| || || ||||| || | ||||| || | || ||||| |||||| Sbjct 466028 GGAGTGCGCCCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGA 466087 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||||||||| | ||||| || || ||| | | | ||||| | ||||| Sbjct 466088 ATACCTTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACC 466147 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | ||||||||| || || || || ||||| || || || ||||| Sbjct 466148 TCTAGCGTGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || ||||| || || |||||||| | || ||||||||||| | || || || Sbjct 462492 CCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAA 462551 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| ||| || || ||||| || | ||||| || | || ||||| |||||| Sbjct 462552 AGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGA 462611 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 || || |||||||| | ||||| || || ||| | | ||||||| | ||||| Sbjct 462612 ATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACC 462671 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || | |||||| ||||| || || || ||||| || || || ||||| Sbjct 462672 TCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 >seq365 Length=450407 Score = 96.9 bits (106), Expect = 3e-15 Identities = 154/219 (70%), Gaps = 4/219 (2%) Strand=Plus/Minus Query 94792 TCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA 94851 || |||||| | || | || |||||||| || | |||||| ||| ||| || | Sbjct 426490 TCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGG--ATAAGGTACGT 426433 Query 94852 --ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCT 94909 ||| || | |||||| || | || |||| | ||||||||| || || ||||||||| Sbjct 426432 CCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGGATACCTTCT 426373 Query 94910 TTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTG 94969 ||||| | || ||||| ||||| ||| || || | | || || |||| ||| Sbjct 426372 TTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACCTCAAGGGTG 426313 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATG 95008 ||||| || || || | |||||| ||||| ||||||||| Sbjct 426312 ATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATG 426274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448232507474640