Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_006633.1 Length=27346 Score E Sequences producing significant alignments: (Bits) Value seq848 221 2e-53 seq237 159 6e-35 seq1271 156 7e-34 >seq848 Length=180487 Score = 221 bits (244), Expect = 2e-53 Identities = 197/242 (81%), Gaps = 15/242 (6%) Strand=Plus/Plus Query 22821 TTGAAGCGTTCCATATTTTTAACAAATGTAGATAATGTTGTGAAACGAGAAAGAGTAGGA 22880 ||||| ||| || | |||| |||||| | |||||| |||||| || |||| | | | | Sbjct 111182 TTGAAACGTGATATGTCTTTA-CAAATGAAAATAATGCTGTGAAGCGGGAAACAATGGAA 111240 Query 22881 GTTACGGATA-ATTATTACGTGAAGCGTTCCAACATTCACGTAACAGGATAATTGGTA-G 22938 |||||||||| ||| ||||||||||||||||| |||||| |||||||||||| |||| | Sbjct 111241 GTTACGGATATATTTTTACGTGAAGCGTTCCA-CATTCATGTAACAGGATAAAGGGTAAG 111299 Query 22939 GAAAGGATTGAGAAAGGATTGTGGAGAGGATCATCTTAATGTGAGTTTATAGAATATGCG 22998 || |||| ||||||||| |||||| |||||||| |||||||||||||| ||| Sbjct 111300 GATAGGAAAGAGAAAGGAA-------AGGATCTTCTTAATGGGAGTTTATAGAATAAGCG 111352 Query 22999 AGAAAAAATTATTAGAGACAGCTCGGACTGGGATACGAACCCAGAACCTTCCGAAGACAT 23058 |||||||||| || ||||||||||||||| ||||||||||||||||||||||||| Sbjct 111353 AGAAAAAATTCG----GATAGCTCGGACTGGGATTCGAACCCAGAACCTTCCGAAGACAT 111408 Query 23059 GT 23060 || Sbjct 111409 GT 111410 >seq237 Length=703356 Score = 159 bits (176), Expect = 6e-35 Identities = 153/190 (81%), Gaps = 6/190 (3%) Strand=Plus/Minus Query 22821 TTGAAGCGTTCCATATTTTTAACAAATGTAGATAATGTTGTGAAACGAGAAAGAGTAGGA 22880 ||||| ||| || | |||| |||||| | |||||| |||||| || |||| | | | | Sbjct 3398 TTGAAACGTGATATGTCTTTA-CAAATGAAAATAATGCTGTGAAGCGGGAAACAATGGAA 3340 Query 22881 GTTACGGATA-ATTATTACGTGAAGCGTTCCAACATTCACGTAACAGGATAATTGGT-AG 22938 |||||||||| ||| |||||||||| ||||| |||||||| ||||||||||| ||| || Sbjct 3339 GTTACGGATATATTTTTACGTGAAGGGTTCC-ACATTCACCTAACAGGATAAAGGGTAAG 3281 Query 22939 GAAAGGATTGAGAAAGGATTGTGGAGAGGATCATCTTAATGTGAGTTTATAGAATATGCG 22998 || |||| ||||||||| | ||| |||| | |||||||| ||||||||| |||| ||| Sbjct 3280 GATAGGAAAGAGAAAGGA--GAGGAAAGGACCTTCTTAATGAGAGTTTATAAAATAAGCG 3223 Query 22999 AGAAAAAATT 23008 || ||||||| Sbjct 3222 AGCAAAAATT 3213 >seq1271 Length=79403 Score = 156 bits (172), Expect = 7e-34 Identities = 135/163 (83%), Gaps = 12/163 (7%) Strand=Plus/Minus Query 22899 GTGAAGCGTTCCAACATTCACGTAACAGGATAATTGGTA-GGAAAGGATTGAGAAAGGAT 22957 ||||||||||||| ||||||||||||||||| |||| || |||| ||||||||| Sbjct 76665 GTGAAGCGTTCCA-CATTCACGTAACAGGAT----GGTAAGGGTAGGAAAGAGAAAGGA- 76612 Query 22958 TGTGGAGAGGATCATCTTAATGTGAGTTTATAGAATATGCGAGAAAAAATTATTAGAGAC 23017 | | | || | | |||||||| |||||||||||||| ||||||||||||| || Sbjct 76611 -GAGAAAAGTACCTTCTTAATGGGAGTTTATAGAATAAGCGAGAAAAAATTCG----GAT 76557 Query 23018 AGCTCGGACTGGGATACGAACCCAGAACCTTCCGAAGACATGT 23060 ||||||||||||||| ||||||||||||||||||||||||||| Sbjct 76556 AGCTCGGACTGGGATTCGAACCCAGAACCTTCCGAAGACATGT 76514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 87378216724758