Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_006643.1 Length=12903 Score E Sequences producing significant alignments: (Bits) Value seq848 199 3e-47 seq237 176 4e-40 seq1271 118 9e-23 >seq848 Length=180487 Score = 199 bits (220), Expect = 3e-47 Identities = 163/194 (84%), Gaps = 12/194 (6%) Strand=Plus/Minus Query 3586 ATCCCAGTCCGAGCTATCTAATAATTTTTTCTCGCATATTCTATAAACTCACATTAAGAT 3645 |||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct 111382 ATCCCAGTCCGAGCTATCCGA--ATTTTTTCTCGCTTATTCTATAAACTCCCATTAAGAA 111325 Query 3646 GATCCTCTCCACAATCCTTTCTCAATCCTTTCC-TACCAATTATCCTGTTACGTGAATGT 3704 |||||| ||||||||| |||| ||| |||| |||||||||||| |||||| Sbjct 111324 GATCCT-------TTCCTTTCTCTTTCCTATCCTTACCCTTTATCCTGTTACATGAATG- 111273 Query 3705 TGGAACGCTTCACGTAATAAT-TATCCGTAACTCCTATTCTTTCCCGCTTCACAGCATTA 3763 ||||||||||||||||| ||| ||||||||||| | ||| |||||||||||||||||||| Sbjct 111272 TGGAACGCTTCACGTAAAAATATATCCGTAACTTCCATTGTTTCCCGCTTCACAGCATTA 111213 Query 3764 TTTATATTTGTTAA 3777 ||| |||||| || Sbjct 111212 TTTTCATTTGTAAA 111199 >seq237 Length=703356 Score = 176 bits (194), Expect = 4e-40 Identities = 145/172 (84%), Gaps = 5/172 (3%) Strand=Plus/Plus Query 3608 AATTTTTTCTCGCATATTCTATAAACTCACATTAAGATGATCCTCTCCACAATCCTTTCT 3667 ||||||| ||||| |||| ||||||||| |||||||| | |||| ||| | |||||||| Sbjct 3213 AATTTTTGCTCGCTTATTTTATAAACTCTCATTAAGAAGGTCCTTTCCTC--TCCTTTCT 3270 Query 3668 CAATCCTTTCCT-ACCAATTATCCTGTTACGTGAATGTTGGAACGCTTCACGTAATAAT- 3725 | |||| |||| ||| ||||||||||| |||||||| ||||| |||||||||| ||| Sbjct 3271 CTTTCCTATCCTTACCCTTTATCCTGTTAGGTGAATGT-GGAACCCTTCACGTAAAAATA 3329 Query 3726 TATCCGTAACTCCTATTCTTTCCCGCTTCACAGCATTATTTATATTTGTTAA 3777 ||||||||||| | ||| ||||||||||||||||||||||| |||||| || Sbjct 3330 TATCCGTAACTTCCATTGTTTCCCGCTTCACAGCATTATTTTCATTTGTAAA 3381 >seq1271 Length=79403 Score = 118 bits (130), Expect = 9e-23 Identities = 109/133 (82%), Gaps = 10/133 (8%) Strand=Plus/Plus Query 3586 ATCCCAGTCCGAGCTATCTAATAATTTTTTCTCGCATATTCTATAAACTCACATTAAGAT 3645 |||||||||||||||||| | |||||||||||| |||||||||||||| |||||||| Sbjct 76542 ATCCCAGTCCGAGCTATCCGA--ATTTTTTCTCGCTTATTCTATAAACTCCCATTAAGAA 76599 Query 3646 GATCCTCTCCACAATCCTTTCTCAATCCTTTCC-TACCAATTATCCTGTTACGTGAATGT 3704 | | || | | | ||||||||| |||| || |||| ||||||||||||||||| Sbjct 76600 GGTACTTTTCTC--TCCTTTCTCTTTCCTACCCTTACC----ATCCTGTTACGTGAATG- 76652 Query 3705 TGGAACGCTTCAC 3717 ||||||||||||| Sbjct 76653 TGGAACGCTTCAC 76665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 41169548317512