Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_006645.1 Length=21388 Score E Sequences producing significant alignments: (Bits) Value seq1323 163 4e-36 seq1930 143 4e-30 seq848 134 2e-27 seq237 129 8e-26 seq791 125 1e-24 seq775 123 3e-24 seq30 116 5e-22 seq1760 113 6e-21 seq5000 105 9e-19 seq1204 102 1e-17 seq1330 98.7 1e-16 seq305 98.7 1e-16 seq543 95.1 2e-15 seq904 91.5 2e-14 seq45 91.5 2e-14 seq283 87.8 2e-13 seq1194 84.2 3e-12 seq1651 80.6 4e-11 >seq1323 Length=71642 Score = 163 bits (180), Expect = 4e-36 Identities = 188/254 (74%), Gaps = 28/254 (11%) Strand=Plus/Minus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGGCATCATGGC 498 ||||||||||||||| ||||| || ||||||||| || | || ||||| | | ||| | Sbjct 2886 AATAGTATATTACACCACAAGGGCCGAAAGTTGAATTTTCGGCCCTGCGCG--TTATGAC 2829 Query 499 ACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTATGC 558 |||| | | | | |||| ||| |||| |||||||||||| ||||||||| || | Sbjct 2828 GAGCAGGACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTTTTCTTCATAGCC 2769 Query 559 GGTCGAAAGTACGTTAAAAATT-------------------GCGTTGAAAA-----TAAT 594 |||||||||||||||| |||| ||||| || | | Sbjct 2768 GGTCGAAAGTACGTTATTAATTTTACTTTTTTTAACTTTAAATGTTGATAAGCATGTTTT 2709 Query 595 TGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggC 654 ||||||||| || |||||||||||||||||||||||| ||||||||||||| | |||||| Sbjct 2708 TGATGCCTG-CCTCGACATTTGCGGCACGAGCGAAGCAAGTGCTGCTGGTC-GTGGGGGC 2651 Query 655 AGGCATCAAATACA 668 |||||||||||||| Sbjct 2650 AGGCATCAAATACA 2637 >seq1930 Length=43951 Score = 143 bits (158), Expect = 4e-30 Identities = 155/206 (75%), Gaps = 26/206 (13%) Strand=Plus/Plus Query 487 GGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTT 546 |||||||||| | |||| | | | | |||| ||| |||| |||||||||||| |||| Sbjct 21243 GGGCATCATGACGAGCAGGACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTT 21302 Query 547 TTCTTGCTATGCGGTCGAAAGTACGTTAAAAATTGC-----------GTTGAAAA----- 590 ||||| || ||||||||||||||||| |||| ||| ||| Sbjct 21303 TTCTTCATAGCCGGTCGAAAGTACGTTATTAATTTTACCTTTTATAAGTTTAAATGTTGT 21362 Query 591 TAA--------TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTG 642 ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 21363 TAAGCATGTTTTTGATGCCTGCCCC-GACATTTGCGGCACGAGCGAAGCGAGTGCTGCTG 21421 Query 643 GTCggggggggCAGGCATCAAATACA 668 ||| | |||||||||||||||||||| Sbjct 21422 GTC-GTGGGGGCAGGCATCAAATACA 21446 >seq848 Length=180487 Score = 134 bits (148), Expect = 2e-27 Identities = 104/120 (87%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 1427 TCCTTTCTCAATCCTTTCCT-ACCAATTATCCTGTTACGTGAATGTTGGAACGCTTCACG 1485 ||||||||| |||| |||| ||| |||||||||||| ||||||| ||||||||||||| Sbjct 111317 TCCTTTCTCTTTCCTATCCTTACCCTTTATCCTGTTACATGAATGT-GGAACGCTTCACG 111259 Query 1486 TAATAAT-TATCCGTAACTCCTATTCTTTCCCGCTTCACAGCATTATTTATATTTGTTAA 1544 ||| ||| ||||||||||| | ||| ||||||||||||||||||||||| |||||| || Sbjct 111258 TAAAAATATATCCGTAACTTCCATTGTTTCCCGCTTCACAGCATTATTTTCATTTGTAAA 111199 >seq237 Length=703356 Score = 129 bits (142), Expect = 8e-26 Identities = 103/120 (86%), Gaps = 3/120 (3%) Strand=Plus/Plus Query 1427 TCCTTTCTCAATCCTTTCCT-ACCAATTATCCTGTTACGTGAATGTTGGAACGCTTCACG 1485 ||||||||| |||| |||| ||| ||||||||||| |||||||| ||||| ||||||| Sbjct 3263 TCCTTTCTCTTTCCTATCCTTACCCTTTATCCTGTTAGGTGAATGT-GGAACCCTTCACG 3321 Query 1486 TAATAAT-TATCCGTAACTCCTATTCTTTCCCGCTTCACAGCATTATTTATATTTGTTAA 1544 ||| ||| ||||||||||| | ||| ||||||||||||||||||||||| |||||| || Sbjct 3322 TAAAAATATATCCGTAACTTCCATTGTTTCCCGCTTCACAGCATTATTTTCATTTGTAAA 3381 >seq791 Length=160919 Score = 125 bits (138), Expect = 1e-24 Identities = 189/273 (69%), Gaps = 42/273 (15%) Strand=Plus/Plus Query 437 ACAATAGTATATTACACTACAAGAGCAGAAAGTTGAGATT-----CCTGCACTG------ 485 ||||||||| ||||||| ||||| || ||||||||| || |||||||| Sbjct 73808 ACAATAGTAGATTACACCACAAGGGCCGAAAGTTGAATTTTCGGCCCTGCACTCGGCTTC 73867 Query 486 ----CGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATAC 541 ||||||||||| | |||| | | | | |||| ||| |||| ||||||||||| Sbjct 73868 GCCTCGGGCATCATGACGAGCAGAACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATAT 73927 Query 542 TATTTTTCTTGCTATGCGGTCGAAAGTACGTTAAAAATT-------------------GC 582 | ||||||| || ||||||| ||||||||| |||| Sbjct 73928 GACTTTTCTTCATAGCCGGTCGAGAGTACGTTATTAATTTTACTTTTTTTAACTTTAAAT 73987 Query 583 GTTGAAAA-----TAATTGATGCCTGC--CCCCGACATTTGCGGCACGAGCGAAGCGAGT 635 ||||| || | ||||||||||| | |||||||||||||||||||||||||| Sbjct 73988 GTTGATAAGCATGTTTTTGATGCCTGCATTTGCTACATTTGCGGCACGAGCGAAGCGAGT 74047 Query 636 GCTGCTGGTCggggggggCAGGCATCAAATACA 668 |||||||||| | | ||||||||| |||||||| Sbjct 74048 GCTGCTGGTC-GTGAGGGCAGGCACCAAATACA 74079 >seq775 Length=133838 Score = 123 bits (136), Expect = 3e-24 Identities = 181/256 (71%), Gaps = 40/256 (16%) Strand=Plus/Plus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCT--GCACTGCGGGCATCATG 496 ||||||||||||||| ||||| || ||||||| | || | || ||||| | ||||| Sbjct 31345 AATAGTATATTACACCACAAGGGCCGAAAGTTAAATTTTCACGGCCCTGCGCG--TCATG 31402 Query 497 GCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTAT 556 | |||| | | | | |||| ||| || | |||||||||||| ||||||||| Sbjct 31403 ACGAGCAGGACCGAGATTTCAACTTTTGGCACGTGTAGTGTATACGATTTTTCTT----- 31457 Query 557 GCGGTCGAAAGTACGTTAAAAATTGCG-----------TTGAAA-----ATAA------- 593 ||||||||||||| |||| || ||| |||| Sbjct 31458 -----CGAAAGTACGTTACTAATTTTACTTTTTTTAACTTTAAATGTTGATAAGCATGTT 31512 Query 594 -TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggg 652 |||||||||||| | ||||||||||||||||||||||||||||||||||||| | |||| Sbjct 31513 TTTGATGCCTGCCAC-GACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTC-GTGGGG 31570 Query 653 gCAGGCATCAAATACA 668 ||||||||| ||||| Sbjct 31571 ACAGGCATCATATACA 31586 >seq30 Length=1964512 Score = 116 bits (128), Expect = 5e-22 Identities = 134/182 (74%), Gaps = 25/182 (14%) Strand=Plus/Minus Query 487 GGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTT 546 |||||||||| | |||| | | | | |||| ||| |||| |||||||||||| |||| Sbjct 1087987 GGGCATCATGACGAGCAGGACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTT 1087928 Query 547 TTCTTGCTATGCGGTCGAAAGTACGTTAAAAATTGCG-----------TTGAAA-----A 590 ||||| ||| ||||||||||||||||| |||| || ||| | Sbjct 1087927 TTCTTCATATCCGGTCGAAAGTACGTTATTAATTTTACTTTTTTTAACTTTAAATATTGA 1087868 Query 591 TAA--------TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTG 642 ||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1087867 TAAGCATGTTTTTGATGCCTGCCCC-GACATTTGCGGCACGAGCGAAGCGAGTGCTGCTG 1087809 Query 643 GT 644 || Sbjct 1087808 GT 1087807 >seq1760 Length=111739 Score = 113 bits (124), Expect = 6e-21 Identities = 114/147 (78%), Gaps = 1/147 (1%) Strand=Plus/Plus Query 435 AAACAATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGG-CATC 493 ||| ||||||||||||||| ||||| | ||||||||| || | || |||| | ||| Sbjct 25540 AAAAAATAGTATATTACACCACAAGGGGCGAAAGTTGAATTTTCGGCCCTGCACGTCATG 25599 Query 494 ATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGC 553 ||| | ||||| | | | | |||| ||| |||| |||||||||||| ||||||||| Sbjct 25600 ATGACGAGCAGTACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTTTTCTTCA 25659 Query 554 TATGCGGTCGAAAGTACGTTAAAAATT 580 || ||||||||||||||||| |||| Sbjct 25660 TAGCCGGTCGAAAGTACGTTATTAATT 25686 Score = 111 bits (122), Expect = 2e-20 Identities = 112/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 436 AACAATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGGCATCAT 495 || ||||||||||||||| ||||| || |||||||| || |||| ||||| |||||| Sbjct 79615 AAGAATAGTATATTACACCACAAGGGCCAAAAGTTGAATTTTCTGCGCTGCG--CATCAT 79672 Query 496 GGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTA 555 | |||| | | | | |||| ||| |||| |||||||||||| ||||||||| || Sbjct 79673 GATGAGCAGGACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTTTTCTTCATA 79732 Query 556 TGCGGTCGAAAGTACGTTAAAAATT 580 ||||||||| ||||||| |||| Sbjct 79733 GCCGGTCGAAACTACGTTATTAATT 79757 >seq5000 Length=16067 Score = 105 bits (116), Expect = 9e-19 Identities = 109/142 (77%), Gaps = 2/142 (1%) Strand=Plus/Minus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGGCATCATGGC 498 ||||||||||||||| ||||| || ||||||||| || | || ||||| | ||||| | Sbjct 11544 AATAGTATATTACACCACAAGGGCCGAAAGTTGAATTTTCGGCCCTGCGCG--TCATGAC 11487 Query 499 ACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTATGC 558 || | | | | | |||| ||| ||| |||||||||||| ||||||||| || | Sbjct 11486 GAGCGGGACCGAGATTTCAACTTTTGACCCGTGTAGTGTATACGATTTTTCTTCATAGCC 11427 Query 559 GGTCGAAAGTACGTTAAAAATT 580 |||||||||||||||| |||| Sbjct 11426 GGTCGAAAGTACGTTATTAATT 11405 >seq1204 Length=92488 Score = 102 bits (112), Expect = 1e-17 Identities = 105/135 (78%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGGCATCATGGC 498 ||||||||||||||| ||||| || ||||||||| || | || |||| || ||||| | Sbjct 65565 AATAGTATATTACACCACAAGGGCCGAAAGTTGAATTTTCGGCCCTGC--GCGTCATGAC 65622 Query 499 ACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTA-TG 557 |||| | | | | |||| ||| |||| |||||||||||| ||||||||| || Sbjct 65623 GAGCAGGACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTTTTCTTCATACCT 65682 Query 558 CGGTCGAAAGTACGT 572 ||||||||||||||| Sbjct 65683 CGGTCGAAAGTACGT 65697 >seq1330 Length=114328 Score = 98.7 bits (108), Expect = 1e-16 Identities = 106/139 (76%), Gaps = 5/139 (4%) Strand=Plus/Plus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGG----CATCA 494 ||||||||||||||| ||||| || ||||||||| || | || ||||| | |||| Sbjct 8572 AATAGTATATTACACCACAAGGGCCGAAAGTTGAATTTTCGGCCCTGCGCGTCATGATCA 8631 Query 495 TGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCT 554 || || |||| | | | |||| ||| |||| |||||||||||| ||||||||| | Sbjct 8632 TGACAAGCAGGAGCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTTTTCTTCAT 8691 Query 555 A-TGCGGTCGAAAGTACGT 572 | ||||||||||||||| Sbjct 8692 ACCTCGGTCGAAAGTACGT 8710 >seq305 Length=613789 Score = 98.7 bits (108), Expect = 1e-16 Identities = 107/138 (78%), Gaps = 8/138 (6%) Strand=Plus/Minus Query 435 AAACAATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGGCATCA 494 ||| ||||||||||||||| ||||| || ||||||||| ||| | || |||||||| Sbjct 10963 AAATAATAGTATATTACACCACAAGGGCCGAAAGTTGA-ATT--TTCA----GGGCATCA 10911 Query 495 TGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCT 554 || | |||| | | | | |||| ||| |||| |||||||||||| ||||||||| | Sbjct 10910 TGACGAGCAGGACCGAGATTTCAAGTTTTGGCCCGTGTAGTGTATACGATTTTTCTTCAT 10851 Query 555 A-TGCGGTCGAAAGTACG 571 | |||||||||||||| Sbjct 10850 ACCTCGGTCGAAAGTACG 10833 >seq543 Length=385242 Score = 95.1 bits (104), Expect = 2e-15 Identities = 104/136 (76%), Gaps = 2/136 (1%) Strand=Plus/Minus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCG-GGCATCATGG 497 ||||||||||||||| ||||| || ||||||||| || | || |||| | ||||||| Sbjct 49635 AATAGTATATTACACAACAAGGGCCGAAAGTTGAATTTTCGGCCTTGCGCGTCATCATGA 49576 Query 498 CACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTA-T 556 | |||| | | | |||| ||| |||| |||||||||||| ||||| ||| || Sbjct 49575 CGAGCAGGGTCGTGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTTTCCTTCATACC 49516 Query 557 GCGGTCGAAAGTACGT 572 ||||||||||||||| Sbjct 49515 TCGGTCGAAAGTACGT 49500 >seq904 Length=244352 Score = 91.5 bits (100), Expect = 2e-14 Identities = 109/144 (76%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGG-CATCATGG 497 || |||||||||||| ||||| || ||||||||| || | || ||||| | ||| ||| Sbjct 43668 AACAGTATATTACACCACAAGGGCCGAAAGTTGAATTTTCGGCCCTGCGCGTCATGATGC 43727 Query 498 CACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTATG 557 | |||| | | | | |||| |||| |||| |||||||||||| ||||||||| || Sbjct 43728 GA-GCAGGACCGAGATTTCAACTTTCGGCCCGTGTAGTGTATACGATTTTTCTTCATAGC 43786 Query 558 CGGTC-GAAAGTACGTTAAAAATT 580 ||||| |||| ||||| |||| Sbjct 43787 CGGTCAAAAAGACCGTTATTAATT 43810 >seq45 Length=1706180 Score = 91.5 bits (100), Expect = 2e-14 Identities = 100/131 (76%), Gaps = 3/131 (2%) Strand=Plus/Minus Query 441 TAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGGCATCATGGCAC 500 ||||||||||||| ||||| || |||| |||| || | || ||||| ||||||| | Sbjct 1178287 TAGTATATTACACCACAAGGGCCGAAATTTGAATTTTCGGCCCTGCG--CATCATGACGA 1178230 Query 501 GCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTA-TGCG 559 |||| | | | | |||| ||| ||| |||||||||||| ||||||||| || || Sbjct 1178229 GCAGGACCGAGATTTCAACTTTTGGCCAGTGTAGTGTATACGATTTTTCTTCATACCTCG 1178170 Query 560 GTCGAAAGTAC 570 ||||||||||| Sbjct 1178169 GTCGAAAGTAC 1178159 >seq283 Length=459087 Score = 87.8 bits (96), Expect = 2e-13 Identities = 101/133 (76%), Gaps = 6/133 (5%) Strand=Plus/Plus Query 439 AATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGGCATCATGGC 498 |||| |||||||||| ||||| | ||||||||| || | || ||||| ||||||| | Sbjct 381978 AATATTATATTACACCACAAGGGTCGAAAGTTGAATTTTCGGCCCTGCG--CATCATGAC 382035 Query 499 ACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTATG- 557 | || | | | | |||| ||| |||| |||||||||||| |||||||| | || Sbjct 382036 GAGTAGGACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTTTTCTGG---TGC 382092 Query 558 CGGTCGAAAGTAC 570 ||||||||||||| Sbjct 382093 CGGTCGAAAGTAC 382105 >seq1194 Length=97921 Score = 84.2 bits (92), Expect = 3e-12 Identities = 105/142 (74%), Gaps = 4/142 (3%) Strand=Plus/Plus Query 440 ATAGTATATTACACTACAAGAGCAGAAAGTTGAGATTCCTGCACTGCGGGCATCATGGCA 499 |||||||||||||| ||||| || ||||||||| || | || ||||| | | | | Sbjct 9549 ATAGTATATTACACCACAAGGGCCGAAAGTTGAATTTTCGGCCCTGCGCGTGTGACGA-- 9606 Query 500 CGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTTTTCTTGCTATGCG 559 |||| | | | | |||| ||| |||| |||||||||||| ||||||||| || || Sbjct 9607 -GCAGGACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTTTTCTTCGTAGCCG 9665 Query 560 GTCG-AAAGTACGTTAAAAATT 580 |||| |||| ||||| |||| Sbjct 9666 GTCGAAAAGGCCGTTATTAATT 9687 >seq1651 Length=83022 Score = 80.6 bits (88), Expect = 4e-11 Identities = 74/94 (79%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 487 GGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTAGTGTATACTATTT 546 |||||||||| | |||| | | | | |||| ||| |||| |||||||||||| |||| Sbjct 70464 GGGCATCATGACGAGCAGGACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACAATTT 70405 Query 547 TTCTTGCTATGCGGTCGAAAGTACGTTAAAAATT 580 ||||| || ||||||||||||||||| |||| Sbjct 70404 TTCTTCATAGCCGGTCGAAAGTACGTTATTAATT 70371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 68314925676162