Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_006647.1 Length=8785 Score E Sequences producing significant alignments: (Bits) Value seq1104 118 6e-23 seq95 113 3e-21 seq157 100 2e-17 seq49 100 2e-17 seq156 98.7 6e-17 seq3975 96.9 2e-16 seq286 96.9 2e-16 seq25 96.9 2e-16 seq210 95.1 7e-16 seq518 91.5 8e-15 seq206 86.0 4e-13 seq32 80.6 1e-11 >seq1104 Length=207343 Score = 118 bits (130), Expect = 6e-23 Identities = 80/90 (89%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||||| || ||||||||||||||||||||| |||||||||||| ||| | | Sbjct 154851 AGCTTCCTATGATCTCAAAACGTCGAGATCTGATGAATACTCGATTTTTGAAAATCTGCC 154910 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAA 1164 ||||| |||||||||||| ||||||||||| Sbjct 154911 TGAAATCAATAACTTCCCAATTTTTGAAAA 154940 >seq95 Length=1238217 Score = 113 bits (124), Expect = 3e-21 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||||| || ||||||||||||||||||||| |||||||||| ||| ||| Sbjct 253023 AGCTTCCTATGATCTCAAAACGTCGAGATCTGATGAATACTCGATTTTCAAAAATCGGCT 252964 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194 ||||| |||||||||||| ||||| ||||| |||| |||||| |||| ||||| Sbjct 252963 TGAAATCAATAACTTCCCAATTTTGAAAAATTAGTGGTTTTTGTAGCGGAAAGTCAAAAA 252904 >seq157 Length=880853 Score = 100 bits (110), Expect = 2e-17 Identities = 96/121 (79%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||||| || ||||||||||||||||||||| |||||||||| | ||| ||| Sbjct 778156 AGCTTCCTATGATCTCAAAACGTCGAGATCTGATGAATACTCGATTTTCGAAAATCGGCC 778215 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAA--TTTTCTTAGCGGGAAGTTAAA 1192 ||||| ||||||| | || ||||| |||| || | |||| | |||| |||| ||| Sbjct 778216 TGAAATCAATAACATTCCAATTTT--GAAATATTAGAGGTTTTTATGGCGGAAAGTCAAA 778273 Query 1193 A 1193 | Sbjct 778274 A 778274 >seq49 Length=1330490 Score = 100 bits (110), Expect = 2e-17 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 ||||||| |||| || ||||||||||||||||||||| ||||||||| | ||| ||| Sbjct 1070161 AGCTTCCCATGATCTCAAAACGTCGAGATCTGATGAATTCTCGATTTTCGAAAATCGGTA 1070220 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194 | ||| |||||||||||| ||||| ||||| |||| ||||| |||| ||||| Sbjct 1070221 TCAAATCAATAACTTCCCAATTTTGAAAAATTAGTGGTTTTTACAGCGGAAAGTCAAAAA 1070280 >seq156 Length=2104774 Score = 98.7 bits (108), Expect = 6e-17 Identities = 95/121 (79%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 ||||||| |||| || ||||| ||||||||||||||| |||||||||| ||| ||| Sbjct 1126799 AGCTTCCCATGATCTCAAAACTTCGAGATCTGATGAATACTCGATTTTCAAAAATCGGCC 1126858 Query 1135 TGAAAA-CAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAA 1193 ||||| |||||||||||| ||||| ||||| |||| |||||| |||| |||| Sbjct 1126859 CGAAAATCAATAACTTCCCAATTTTGAAAAATTAGTGGTTTTGGTAGCGGAAAGTCAAAA 1126918 Query 1194 A 1194 | Sbjct 1126919 A 1126919 >seq3975 Length=8201 Score = 96.9 bits (106), Expect = 2e-16 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||| | |||||||||| ||||||||||||| |||| ||||| | ||| ||| Sbjct 3341 AGCTTCCTATTATCTTAAAACGTTGAGATCTGATGAATACTCAATTTTGGAAAATCGGTA 3400 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAAT 1165 ||||| ||||||||| || ||||| ||||| Sbjct 3401 TGAAATCAATAACTTTCCAATTTTGAAAAAT 3431 >seq286 Length=2588622 Score = 96.9 bits (106), Expect = 2e-16 Identities = 91/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 1079 TCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGGTGAA 1138 |||||||| || ||||||||||||||||||||| ||| |||||| | ||| ||| ||| Sbjct 2423745 TCCTATGATCTCAAAACGTCGAGATCTGATGAATACTTGATTTTCGAAAATCGGCCTGAC 2423686 Query 1139 AACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194 | ||||||||||| ||||| ||||| |||| |||||| |||| ||||| Sbjct 2423685 ATCAATAACTTCCAAATTTTGAAAAATTAGTGGTTTTTGTAGCGGAAAGTCAAAAA 2423630 >seq25 Length=2050986 Score = 96.9 bits (106), Expect = 2e-16 Identities = 94/120 (78%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||| ||||| || |||||||||||| |||||||| |||||||||| | ||| ||| Sbjct 438043 AGCTTCATATGATCTCAAAACGTCGAGAACTGATGAATACTCGATTTTCGAAAATCGGCC 437984 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194 ||||| ||||||| | | | |||||||||| |||| |||||| |||| ||||| Sbjct 437983 TGAAATCAATAACGTTC--AATTTTGAAAATTAGTGGTTTTTGTAGCGGAAAGTCAAAAA 437926 >seq210 Length=752505 Score = 95.1 bits (104), Expect = 7e-16 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||||| || ||||||||||||| ||| ||| |||| ||||| | ||| ||| Sbjct 241569 AGCTTCCTATGATCTCAAAACGTCGAGATTTGACGAATACTCAATTTTCGAAAATCGGTA 241628 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194 ||| |||||||||||| |||| ||||| | |||| ||| ||||||| ||||| Sbjct 241629 CTAAATCAATAACTTCCCAATTTCGAAAAATTTGTGGTTTTTATAGTGGGAAGTCAAAAA 241688 >seq518 Length=506962 Score = 91.5 bits (100), Expect = 8e-15 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||||| || |||||| |||||||||||||| |||||||||| | ||| ||| Sbjct 114328 AGCTTCCTATGATCTCAAAACGCCGAGATCTGATGAATACTCGATTTTCGAAAATCGGCC 114387 Query 1135 TGAAAACAATAACTT 1149 ||||| ||||||||| Sbjct 114388 TGAAATCAATAACTT 114402 >seq206 Length=1580514 Score = 86.0 bits (94), Expect = 4e-13 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||||| || |||| |||||||||||||||| | |||||||| | ||| ||| Sbjct 771936 AGCTTCCTATGATCTCAAAAAGTCGAGATCTGATGAATAATCGATTTTCGAAAATCGGCC 771877 Query 1135 TGAAAACAATAACTT 1149 ||||| ||||||||| Sbjct 771876 TGAAATCAATAACTT 771862 >seq32 Length=4451668 Score = 80.6 bits (88), Expect = 1e-11 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 1080 CCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGGTGAAA 1139 |||| || | ||||||||||||||||||||| |||||||||| | ||| ||| || | Sbjct 1661350 CCTACGATGTCAAAACGTCGAGATCTGATGAATACTCGATTTTCGAAAATCGGTCCGACA 1661291 Query 1140 ACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAA 1193 |||||||||| ||||| ||||| |||| |||||| |||| |||| Sbjct 1661290 TAAATAACTTCCTAATTTTGAAAAATTAGTGGTTTTTGTAGCGGAAAGTCAAAA 1661237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27993501067064