Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_006653.1 Length=26062 Score E Sequences producing significant alignments: (Bits) Value seq1930 233 3e-57 seq30 187 4e-43 seq2323 170 3e-38 seq1651 165 1e-36 seq1257 143 4e-30 seq56 141 2e-29 seq1911 131 3e-26 seq1323 131 3e-26 seq791 129 1e-25 seq153 111 3e-20 seq775 107 3e-19 >seq1930 Length=43951 Score = 233 bits (258), Expect = 3e-57 Identities = 219/279 (78%), Gaps = 26/279 (9%) Strand=Plus/Minus Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 21446 TGTATTTGATGCCTGCCCCCACGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 21387 Query 20640 GGGGCAGGCATCAA------------------TTA---TTTTCAACGC---AATTTTTAA 20675 ||| |||||||||| ||| || | || | |||| ||| Sbjct 21386 GGG-CAGGCATCAAAAACATGCTTAACAACATTTAAACTTATAAAAGGTAAAATTAATAA 21328 Query 20676 CGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAGAG 20735 |||||||||||||| || ||||||||| |||||||||||| |||| ||| |||| | Sbjct 21327 CGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACACGGGCCAAAAGTTGAAAT 21268 Query 20736 CCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCA 20794 | | | |||| | |||||||||||||||||||| ||||||| |||| ||||||| || Sbjct 21267 CTCGGTCCTGCTCGTCATGATGCCCTCGGCTTCGCTTCGGGCATCATGACGCGCAGGGCC 21208 Query 20795 GGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 | || ||||||||| |||||||| |||||||||||||| Sbjct 21207 GAAAATTCAACTTTCGGCCCTTGTGGTGTAATATACTAT 21169 Score = 223 bits (246), Expect = 6e-54 Identities = 224/289 (78%), Gaps = 28/289 (10%) Strand=Plus/Minus Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 21446 TGTATTTGATGCCTGCCCCCAC-GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 21388 Query 5275 GGGGGCAGGCATCAA-----------------ttt----ttttCAACGC---AATTTTTA 5310 |||| |||||||||| ||| || | || | |||| || Sbjct 21387 GGGG-CAGGCATCAAAAACATGCTTAACAACATTTAAACTTATAAAAGGTAAAATTAATA 21329 Query 5311 ACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAGA 5370 ||||||||||||||| || ||||||| | |||||||||||| |||| ||| |||| | Sbjct 21328 ACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACACGGGCCAAAAGTTGAAA 21269 Query 5371 GCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCAT-ATGGCGCGCAGTGC 5429 | | | |||| | |||||||||||||||||||| |||||||| ||| ||||||| || Sbjct 21268 TCTCGGTCCTGCTCGTCATGATGCCCTCGGCTTCGCTTCGGGCATCATGACGCGCAGGGC 21209 Query 5430 AGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATTTCTCTAA 5478 | || ||| |||||| |||||||| |||||||||||||||| || || Sbjct 21208 CGAAAATTCA-ACTTTCGGCCCTTGTGGTGTAATATACTATTTTTCCAA 21161 Score = 127 bits (140), Expect = 3e-25 Identities = 126/165 (76%), Gaps = 25/165 (15%) Strand=Plus/Plus Query 18723 CCGAGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATTG---CG 18779 ||| ||||||||||| | ||||||| || ||||||||||||||||| |||| | Sbjct 21283 CCGTGTAGTGTATACGATTTTTCTTCATAGCCGGTCGAAAGTACGTTATTAATTTTACCT 21342 Query 18780 TTGaaaa----aaaT-----------------TGATGCCTGCCCCCGACATTTGCGGCAC 18818 || | || |||| ||||||||||||| |||||||||||||| Sbjct 21343 TTTATAAGTTTAAATGTTGTTAAGCATGTTTTTGATGCCTGCCCC-GACATTTGCGGCAC 21401 Query 18819 GAGCGAAGCGAGTGCTGCTGGTCgggggggCAGGCATCAAATACA 18863 |||||||||||||||||||||||| |||||||||||||||||||| Sbjct 21402 GAGCGAAGCGAGTGCTGCTGGTCGTGGGGGCAGGCATCAAATACA 21446 Score = 86.0 bits (94), Expect = 1e-12 Identities = 69/81 (85%), Gaps = 2/81 (2%) Strand=Plus/Plus Query 18648 GAGAAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT 18707 || |||||||||||||||| |||||||| ||||| |||| || | || ||||||| ||| Sbjct 21164 GAAAAATAGTATATTACACCACAAGGGCCGAAAG-TTGAATTTTCGGCCCTGCGCGTCAT 21222 Query 18708 -ATGCCCGAGGCGAAGCCGAG 18727 |||||||| ||||||||||| Sbjct 21223 GATGCCCGAAGCGAAGCCGAG 21243 >seq30 Length=1964512 Score = 187 bits (206), Expect = 4e-43 Identities = 191/250 (76%), Gaps = 26/250 (10%) Strand=Plus/Plus Query 20603 ACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGCAGGCATCAA--------T 20654 |||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 1087807 ACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGG-CAGGCATCAAAAACATGCT 1087865 Query 20655 TATT----TTCAACGC------------AATTTTTAACGTACTTTCGACCGCATAGCAAG 20698 ||| || || | |||| ||||||||||||||||| ||| ||| Sbjct 1087866 TATCAATATTTAAAGTTAAAAAAAGTAAAATTAATAACGTACTTTCGACCGGATATGAAG 1087925 Query 20699 AAAAATAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGATGC 20758 |||||| |||||||||||| |||| ||| |||| | | | | |||| | |||||||| Sbjct 1087926 AAAAATCGTATACACTACACGGGCCAAAAGTTGAAATCTCGGTCCTGCTCGTCATGATGC 1087985 Query 20759 CCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCCCTTG 20817 ||||||||||||||| |||| || | ||||||| || | || ||||||||| ||||||| Sbjct 1087986 CCTCGGCTTCGCCTCAGGCATCACGACGCGCAGGGCCGAAAATTCAACTTTCGGCCCTTG 1088045 Query 20818 TAGTGTAATA 20827 | |||||||| Sbjct 1088046 TGGTGTAATA 1088055 Score = 172 bits (190), Expect = 9e-39 Identities = 196/262 (75%), Gaps = 31/262 (12%) Strand=Plus/Plus Query 5239 ACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGGGCAGGCATCAAt-------t 5291 |||||||||||||||||||||||||||||||||||||||| |||||||||| | Sbjct 1087807 ACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCGGGG-CAGGCATCAAAAACATGCT 1087865 Query 5292 ttt-----ttCAACGC------------AATTTTTAACGTACTTTCGACCGCATAGTAAG 5334 | | || || | |||| ||||||||||||||||| ||| ||| Sbjct 1087866 TATCAATATTTAAAGTTAAAAAAAGTAAAATTAATAACGTACTTTCGACCGGATATGAAG 1087925 Query 5335 AAAACTAGTATACACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGATGC 5394 |||| | |||||||||||| |||| ||| |||| | | | | |||| | |||||||| Sbjct 1087926 AAAAATCGTATACACTACACGGGCCAAAAGTTGAAATCTCGGTCCTGCTCGTCATGATGC 1087985 Query 5395 CCTCGGCTTCGCCTCGGGCAT-ATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGCCCTT 5453 ||||||||||||||| ||||| | | ||||||| || | || ||| |||||| |||||| Sbjct 1087986 CCTCGGCTTCGCCTCAGGCATCACGACGCGCAGGGCCGAAAATTCA-ACTTTCGGCCCTT 1088044 Query 5454 GTAGTGTAA----TATACTATT 5471 || |||||| ||||||||| Sbjct 1088045 GTGGTGTAATAAGTATACTATT 1088066 Score = 89.7 bits (98), Expect = 9e-14 Identities = 103/142 (73%), Gaps = 25/142 (18%) Strand=Plus/Minus Query 18723 CCGAGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATTGCG--- 18779 ||| ||||||||||| | ||||||| ||| ||||||||||||||||| |||| Sbjct 1087947 CCGTGTAGTGTATACGATTTTTCTTCATATCCGGTCGAAAGTACGTTATTAATTTTACTT 1087888 Query 18780 ----------------TTGaaaaaaaT-----TGATGCCTGCCCCCGACATTTGCGGCAC 18818 |||| || || ||||||||||||| |||||||||||||| Sbjct 1087887 TTTTTAACTTTAAATATTGATAAGCATGTTTTTGATGCCTGCCCC-GACATTTGCGGCAC 1087829 Query 18819 GAGCGAAGCGAGTGCTGCTGGT 18840 |||||||||||||||||||||| Sbjct 1087828 GAGCGAAGCGAGTGCTGCTGGT 1087807 >seq2323 Length=23494 Score = 170 bits (188), Expect = 3e-38 Identities = 180/239 (75%), Gaps = 25/239 (10%) Strand=Plus/Minus Query 20619 TCGCTCGTGCCGCAAATGTCGGGGGCAGGCATCAATTA-----TTTTCAAC--------- 20664 |||||||||||||||||||||||| |||||||||| | || ||||| Sbjct 21006 TCGCTCGTGCCGCAAATGTCGGGG-CAGGCATCAAAAACATGCTTATCAACATTTAAAGT 20948 Query 20665 ---------GCAATTTTTAACGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTA 20715 | |||| ||||||||||||||||| || ||||||||| |||||||||| Sbjct 20947 TAAAAAAGTGAAATTAATAACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTA 20888 Query 20716 CATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG 20775 || ||| ||| |||| | | | | |||| | ||||||||||||||||||||||||| Sbjct 20887 CACGGGTTAAAAGTTGAAATCTCGGTCCTGCTCGTCATGATGCCCTCGGCTTCGCCTCGG 20828 Query 20776 GCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 ||| |||| ||||||| | | || ||||||||| |||||||| |||||||||||||| Sbjct 20827 GCATCATGACGCGCAGGACCGAAAATTCAACTTTCGGCCCTTGTGGTGTAATATACTAT 20769 Score = 163 bits (180), Expect = 5e-36 Identities = 181/242 (75%), Gaps = 26/242 (11%) Strand=Plus/Minus Query 5255 TCGCTCGTGCCGCAAATGTCGGGGGCAGGCATCAA-----tttttttCAAC--------- 5300 |||||||||||||||||||||||| |||||||||| | || ||||| Sbjct 21006 TCGCTCGTGCCGCAAATGTCGGGG-CAGGCATCAAAAACATGCTTATCAACATTTAAAGT 20948 Query 5301 ---------GCAATTTTTAACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTA 5351 | |||| ||||||||||||||||| || ||||||| | |||||||||| Sbjct 20947 TAAAAAAGTGAAATTAATAACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTA 20888 Query 5352 CATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGG 5411 || ||| ||| |||| | | | | |||| | ||||||||||||||||||||||||| Sbjct 20887 CACGGGTTAAAAGTTGAAATCTCGGTCCTGCTCGTCATGATGCCCTCGGCTTCGCCTCGG 20828 Query 5412 GCAT-ATGGCGCGCAGTGCAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTAT 5470 |||| ||| ||||||| | | || ||| |||||| |||||||| |||||||||||||| Sbjct 20827 GCATCATGACGCGCAGGACCGAAAATTCA-ACTTTCGGCCCTTGTGGTGTAATATACTAT 20769 Query 5471 TT 5472 || Sbjct 20768 TT 20767 Score = 84.2 bits (92), Expect = 4e-12 Identities = 67/78 (86%), Gaps = 2/78 (3%) Strand=Plus/Plus Query 18651 AAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-AT 18709 |||||||||||||||| |||||||| ||||| |||| || | | ||||||| ||| || Sbjct 20767 AAATAGTATATTACACCACAAGGGCCGAAAG-TTGAATTTTCGGTCCTGCGCGTCATGAT 20825 Query 18710 GCCCGAGGCGAAGCCGAG 18727 |||||||||||||||||| Sbjct 20826 GCCCGAGGCGAAGCCGAG 20843 >seq1651 Length=83022 Score = 165 bits (182), Expect = 1e-36 Identities = 138/168 (82%), Gaps = 1/168 (1%) Strand=Plus/Plus Query 20667 AATTTTTAACGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAA 20726 |||| ||||||||||||||||| || ||||||||| |||||||||||| |||| || Sbjct 70371 AATTAATAACGTACTTTCGACCGGCTATGAAGAAAAATTGTATACACTACACGGGCCAAA 70430 Query 20727 ATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCG 20785 | |||| | | | | |||| | |||||||||||||||||||||||||||| | || || Sbjct 70431 AGTTGAAATCTCGGTCCTGCTCGTCATGATGCCCTCGGCTTCGCCTCGGGCATCTTGACG 70490 Query 20786 CGCAGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 ||||| || | || ||||||||| |||||||| |||||||||||||| Sbjct 70491 CGCAGGGCCGAAAATTCAACTTTCGGCCCTTGTGGTGTAATATACTAT 70538 Score = 156 bits (172), Expect = 7e-34 Identities = 138/170 (81%), Gaps = 2/170 (1%) Strand=Plus/Plus Query 5303 AATTTTTAACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAA 5362 |||| ||||||||||||||||| || ||||||| | |||||||||||| |||| || Sbjct 70371 AATTAATAACGTACTTTCGACCGGCTATGAAGAAAAATTGTATACACTACACGGGCCAAA 70430 Query 5363 ATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCAT-ATGGCG 5421 | |||| | | | | |||| | ||||||||||||||||||||||||||||| || || Sbjct 70431 AGTTGAAATCTCGGTCCTGCTCGTCATGATGCCCTCGGCTTCGCCTCGGGCATCTTGACG 70490 Query 5422 CGCAGTGCAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATT 5471 ||||| || | || ||| |||||| |||||||| ||||||||||||||| Sbjct 70491 CGCAGGGCCGAAAATTCA-ACTTTCGGCCCTTGTGGTGTAATATACTATT 70539 Score = 82.4 bits (90), Expect = 1e-11 Identities = 66/77 (86%), Gaps = 2/77 (3%) Strand=Plus/Minus Query 18652 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCG-CCATATG 18710 ||||||||||||||| |||||||| ||||| |||| || | || ||||||| | | ||| Sbjct 70539 AATAGTATATTACACCACAAGGGCCGAAAG-TTGAATTTTCGGCCCTGCGCGTCAAGATG 70481 Query 18711 CCCGAGGCGAAGCCGAG 18727 ||||||||||||||||| Sbjct 70480 CCCGAGGCGAAGCCGAG 70464 >seq1257 Length=119319 Score = 143 bits (158), Expect = 4e-30 Identities = 130/161 (81%), Gaps = 2/161 (1%) Strand=Plus/Minus Query 20675 ACGTACTTTCGACCGCA-TAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAG 20733 ||||||||||||||| || ||||| ||| |||||||||||| |||| ||| |||| Sbjct 54631 ACGTACTTTCGACCGAGGTATGAAGAATAATCGTATACACTACACGGGCCAAAAGTTGAA 54572 Query 20734 AGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTG 20792 | | | | | || || ||||||||||||||||||||||||| | |||| ||||||| | Sbjct 54571 ATCTCGGTCCCGCTTGTGATGATGCCCTCGGCTTCGCCTCGGGTATCATGACGCGCAGGG 54512 Query 20793 CAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 | | || ||||||||| |||||||| |||||||||||||| Sbjct 54511 CCGAAAATTCAACTTTCGGCCCTTGTGGTGTAATATACTAT 54471 Score = 134 bits (148), Expect = 2e-27 Identities = 130/163 (80%), Gaps = 3/163 (2%) Strand=Plus/Minus Query 5311 ACGTACTTTCGACCGCA-TAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGAG 5369 ||||||||||||||| || ||||| | | |||||||||||| |||| ||| |||| Sbjct 54631 ACGTACTTTCGACCGAGGTATGAAGAATAATCGTATACACTACACGGGCCAAAAGTTGAA 54572 Query 5370 AGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCAT-ATGGCGCGCAGTG 5428 | | | | | || || ||||||||||||||||||||||||| || ||| ||||||| | Sbjct 54571 ATCTCGGTCCCGCTTGTGATGATGCCCTCGGCTTCGCCTCGGGTATCATGACGCGCAGGG 54512 Query 5429 CAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATT 5471 | | || ||| |||||| |||||||| ||||||||||||||| Sbjct 54511 CCGAAAATTCA-ACTTTCGGCCCTTGTGGTGTAATATACTATT 54470 Score = 82.4 bits (90), Expect = 1e-11 Identities = 66/77 (86%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 18652 AATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT-ATG 18710 ||||||||||||||| |||||||| ||||| |||| || | || ||||||| ||| || Sbjct 54470 AATAGTATATTACACCACAAGGGCCGAAAG-TTGAATTTTCGGCCCTGCGCGTCATGATA 54528 Query 18711 CCCGAGGCGAAGCCGAG 18727 ||||||||||||||||| Sbjct 54529 CCCGAGGCGAAGCCGAG 54545 >seq56 Length=1279862 Score = 141 bits (156), Expect = 2e-29 Identities = 133/168 (79%), Gaps = 1/168 (1%) Strand=Plus/Minus Query 20667 AATTTTTAACGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAA 20726 |||| ||||||||||||||||| || ||||||||| ||||| |||||| |||| || Sbjct 1122995 AATTAATAACGTACTTTCGACCGGCTATGAAGAAAAATCGTATATACTACACGGGCCAAA 1122936 Query 20727 ATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCG 20785 | |||| | | |||| ||||||||||||||||||||||||| || |||| | Sbjct 1122935 AGTTGAAATATAGGTCCTGCTCCTCATGATGCCCTCGGCTTCGCCTCGGACATCATGAGG 1122876 Query 20786 CGCAGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 ||||| || | || ||||||||| |||||||| |||||||||||||| Sbjct 1122875 CGCAGGGCCGAAAATTCAACTTTCGGCCCTTGTGGTGTAATATACTAT 1122828 Score = 131 bits (144), Expect = 3e-26 Identities = 132/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 5303 AATTTTTAACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAA 5362 |||| ||||||||||||||||| || ||||||| | ||||| |||||| |||| || Sbjct 1122995 AATTAATAACGTACTTTCGACCGGCTATGAAGAAAAATCGTATATACTACACGGGCCAAA 1122936 Query 5363 ATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCAT-ATGGCG 5421 | |||| | | |||| ||||||||||||||||||||||||| ||| ||| | Sbjct 1122935 AGTTGAAATATAGGTCCTGCTCCTCATGATGCCCTCGGCTTCGCCTCGGACATCATGAGG 1122876 Query 5422 CGCAGTGCAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTAT 5470 ||||| || | || ||| |||||| |||||||| |||||||||||||| Sbjct 1122875 CGCAGGGCCGAAAATTCA-ACTTTCGGCCCTTGTGGTGTAATATACTAT 1122828 >seq1911 Length=50175 Score = 131 bits (144), Expect = 3e-26 Identities = 130/166 (78%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 20667 AATTTTTAACGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAA 20726 |||| |||||||||||| |||| || ||||||||| || |||||||| |||| || Sbjct 12341 AATTAATAACGTACTTTCAACCGGCTATGAAGAAAAATCTTA-ACACTACACGGGCCAAA 12283 Query 20727 ATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCG 20785 | |||| | | | | |||| | ||| ||||||||||||||||||| |||| |||| || Sbjct 12282 AGTTGAAATCTCAGTCCTGCTCGTCATAATGCCCTCGGCTTCGCCTCTGGCATCATGACG 12223 Query 20786 CGCAGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACT 20831 |||| || | || ||||||||| ||||||| |||||||||||| Sbjct 12222 CGCAAGGCCGAAAATTCAACTTTCGACCCTTGTGGTGTAATATACT 12177 Score = 120 bits (132), Expect = 5e-23 Identities = 129/167 (77%), Gaps = 3/167 (2%) Strand=Plus/Minus Query 5303 AATTTTTAACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAA 5362 |||| |||||||||||| |||| || ||||||| | || |||||||| |||| || Sbjct 12341 AATTAATAACGTACTTTCAACCGGCTATGAAGAAAAATCTTA-ACACTACACGGGCCAAA 12283 Query 5363 ATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCAT-ATGGCG 5421 | |||| | | | | |||| | ||| ||||||||||||||||||| ||||| ||| || Sbjct 12282 AGTTGAAATCTCAGTCCTGCTCGTCATAATGCCCTCGGCTTCGCCTCTGGCATCATGACG 12223 Query 5422 CGCAGTGCAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACT 5468 |||| || | || ||| |||||| ||||||| |||||||||||| Sbjct 12222 CGCAAGGCCGAAAATTCA-ACTTTCGACCCTTGTGGTGTAATATACT 12177 >seq1323 Length=71642 Score = 131 bits (144), Expect = 3e-26 Identities = 134/177 (76%), Gaps = 25/177 (14%) Strand=Plus/Plus Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 2637 TGTATTTGATGCCTGCCCCCACGACCAGCAGCACTTGCTTCGCTCGTGCCGCAAATGTC- 2695 Query 20640 GGGGCAGGCATCAA--------TTAT-----TTTCAA-----------CGCAATTTTTAA 20675 | |||||||||||| |||| ||| || |||| ||| Sbjct 2696 GAGGCAGGCATCAAAAACATGCTTATCAACATTTAAAGTTAAAAAAAGTAAAATTAATAA 2755 Query 20676 CGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGA 20732 |||||||||||||| || ||||||||| |||||||||||| |||| ||| |||| Sbjct 2756 CGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACACGGGCCAAAAGTTGA 2812 Score = 129 bits (142), Expect = 1e-25 Identities = 179/253 (71%), Gaps = 42/253 (17%) Strand=Plus/Minus Query 18651 AAATAGTATATTACACTACAAGGGCAGAAAGTTTGAGATTCCTGCACTGCGCGCCAT--- 18707 |||||||||||||||| |||||||| ||||||| || || | || ||||||| || Sbjct 2887 AAATAGTATATTACACCACAAGGGCCGAAAGTT-GAATTTTCGGCCCTGCGCGTTATGAC 2829 Query 18708 ----ATGCCCGAGGCG--AAG-------CCGAGTAGTGTATACTAGTTTTCTTACTATGC 18754 | | ||||| || ||| ||||||||||| | ||||||| || | Sbjct 2828 GAGCAGGACCGAGATTTCAACTTTTGGCCCGTGTAGTGTATACGATTTTTCTTCATAGCC 2769 Query 18755 GGTCGAAAGTACGTTAAAAATTGC-------------------GTTGaaaaaaaT----- 18790 |||||||||||||||| |||| ||||| || || Sbjct 2768 GGTCGAAAGTACGTTATTAATTTTACTTTTTTTAACTTTAAATGTTGATAAGCATGTTTT 2709 Query 18791 TGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggCA 18850 ||||||||||| | ||||||||||||||||||||||| |||||||||||||| ||||||| Sbjct 2708 TGATGCCTGCCTC-GACATTTGCGGCACGAGCGAAGCAAGTGCTGCTGGTCGTGGGGGCA 2650 Query 18851 GGCATCAAATACA 18863 ||||||||||||| Sbjct 2649 GGCATCAAATACA 2637 Score = 120 bits (132), Expect = 5e-23 Identities = 132/178 (74%), Gaps = 26/178 (15%) Strand=Plus/Plus Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274 |||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||| Sbjct 2637 TGTATTTGATGCCTGCCCCCAC-GACCAGCAGCACTTGCTTCGCTCGTGCCGCAAATGTC 2695 Query 5275 GGGGGCAGGCATCA-----AtttttttCAAC-------------------GCAATTTTTA 5310 | ||||||||||| || || ||||| |||| || Sbjct 2696 -GAGGCAGGCATCAAAAACATGCTTATCAACATTTAAAGTTAAAAAAAGTAAAATTAATA 2754 Query 5311 ACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGA 5368 ||||||||||||||| || ||||||| | |||||||||||| |||| ||| |||| Sbjct 2755 ACGTACTTTCGACCGGCTATGAAGAAAAATCGTATACACTACACGGGCCAAAAGTTGA 2812 >seq791 Length=160919 Score = 129 bits (142), Expect = 1e-25 Identities = 194/280 (69%), Gaps = 37/280 (13%) Strand=Plus/Minus Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGT-- 20637 |||||||| ||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 74079 TGTATTTGGTGCCTGCCCTCACGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTAG 74020 Query 20638 CGGGGGCAGGCATCAA--------TTAT-----TTTCAA-----------CGCAATTTTT 20673 | ||||||||||| |||| ||| || |||| | Sbjct 74019 CAAATGCAGGCATCAAAAACATGCTTATCAACATTTAAAGTTAAAAAAAGTAAAATTAAT 73960 Query 20674 AACGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAAATTTGAG 20733 |||||||| ||||||| || ||||||| | ||||||||||| |||| ||| |||| Sbjct 73959 AACGTACTCTCGACCGGCTATGAAGAAAAGTCATATACACTACACGGGCCAAAAGTTGAA 73900 Query 20734 AGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCACATGGCGCGCAGTGC 20793 | | | | |||| | |||||||||| ||| ||| | | |||| || Sbjct 73899 ATCTCGGTTCTGCTCGTCATGATGCCCGAGGCGAAGCC-----------GAGTGCAGGGC 73851 Query 20794 AGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 | || ||||||||| |||||||| ||||||| |||||| Sbjct 73850 CGAAAATTCAACTTTCGGCCCTTGTGGTGTAATCTACTAT 73811 Score = 118 bits (130), Expect = 2e-22 Identities = 194/283 (69%), Gaps = 39/283 (14%) Strand=Plus/Minus Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGT- 5273 |||||||| ||||||||| | | |||||||||||||||||||||||||||||||||||| Sbjct 74079 TGTATTTGGTGCCTGCCCTCAC-GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTA 74021 Query 5274 -CGGGGGCAGGCATCA-----AtttttttCAAC-------------------GCAATTTT 5308 | |||||||||| || || ||||| |||| Sbjct 74020 GCAAATGCAGGCATCAAAAACATGCTTATCAACATTTAAAGTTAAAAAAAGTAAAATTAA 73961 Query 5309 TAACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAAATTTGA 5368 ||||||||| ||||||| || ||||||| | ||||||||||| |||| ||| |||| Sbjct 73960 TAACGTACTCTCGACCGGCTATGAAGAAAAGTCATATACACTACACGGGCCAAAAGTTGA 73901 Query 5369 GAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCATATGGCGCGCAGTG 5428 | | | | |||| | |||||||||| ||| ||| | | |||| | Sbjct 73900 AATCTCGGTTCTGCTCGTCATGATGCCCGAGGCGAAGCC-----------GAGTGCAGGG 73852 Query 5429 CAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATT 5471 | | || ||| |||||| |||||||| ||||||| ||||||| Sbjct 73851 CCGAAAATTCA-ACTTTCGGCCCTTGTGGTGTAATCTACTATT 73810 Score = 95.1 bits (104), Expect = 2e-15 Identities = 67/76 (88%), Gaps = 2/76 (3%) Strand=Plus/Plus Query 18790 TTGATGCCTGCCCCCG--ACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggg 18847 ||||||||||| | ||||||||||||||||||||||||||||||||||||| | || Sbjct 74004 TTGATGCCTGCATTTGCTACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCGTGAGG 74063 Query 18848 gCAGGCATCAAATACA 18863 ||||||| |||||||| Sbjct 74064 GCAGGCACCAAATACA 74079 >seq153 Length=995095 Score = 111 bits (122), Expect = 3e-20 Identities = 126/168 (75%), Gaps = 1/168 (1%) Strand=Plus/Plus Query 20667 AATTTTTAACGTACTTTCGACCGCATAGCAAGAAAAATAGTATACACTACATGGGCAGAA 20726 |||| |||||||||||| |||| || ||||||||| ||||||||||| |||| || Sbjct 140851 AATTAATAACGTACTTTCAACCGGTTATGAAGAAAAATCATATACACTACACGGGCCAAA 140910 Query 20727 ATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCG 20785 | |||| | | | | |||| | |||||||||| || ||| ||||| |||| || Sbjct 140911 AGTTGAAATCTCGGTCCTGCTCGTCATGATGCCCGAGGTGAAGCCGAGGGCATCATGACG 140970 Query 20786 CGCAGTGCAGGAATCTCAACTTTCTGCCCTTGTAGTGTAATATACTAT 20833 |||| || || ||||||||| |||||||| |||||||||| ||| Sbjct 140971 AGCAGGGCCAAAAATTCAACTTTCGGCCCTTGTGGTGTAATATATTAT 141018 Score = 105 bits (116), Expect = 1e-18 Identities = 130/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 5303 AATTTTTAACGTACTTTCGACCGCATAGTAAGAAAACTAGTATACACTACATGGGCAGAA 5362 |||| |||||||||||| |||| || ||||||| | ||||||||||| |||| || Sbjct 140851 AATTAATAACGTACTTTCAACCGGTTATGAAGAAAAATCATATACACTACACGGGCCAAA 140910 Query 5363 ATTTGAGAGCCCTGAACTGCGTGCCATGATGCCCTCGGCTTCGCCTCGGGCAT-ATGGCG 5421 | |||| | | | | |||| | |||||||||| || ||| |||||| ||| || Sbjct 140911 AGTTGAAATCTCGGTCCTGCTCGTCATGATGCCCGAGGTGAAGCCGAGGGCATCATGACG 140970 Query 5422 CGCAGTGCAGGAATCTCAGACTTTCTGCCCTTGTAGTGTAATATACTATTTCTCT 5476 |||| || || ||| |||||| |||||||| |||||||||| ||||| ||| Sbjct 140971 AGCAGGGCCAAAAATTCA-ACTTTCGGCCCTTGTGGTGTAATATATTATTTTTCT 141024 Score = 86.0 bits (94), Expect = 1e-12 Identities = 100/133 (75%), Gaps = 4/133 (3%) Strand=Plus/Minus Query 20696 AAGAAAAATAGTATA---CACTACATGGGCAGAAATTTGAGAGCCCTGAACTGCGTGCCA 20752 |||||||||| |||| ||| ||| |||| |||| |||| | |||| | || Sbjct 141025 AAGAAAAATAATATATTACACCACAAGGGCCGAAAGTTGAATTTTTGGCCCTGCTCGTCA 140966 Query 20753 TGATGCCCTCGGCTTCGCCTCGGGCA-CATGGCGCGCAGTGCAGGAATCTCAACTTTCTG 20811 |||||||||||||||| ||||||||| |||| || |||| | | || |||||||| | Sbjct 140965 TGATGCCCTCGGCTTCACCTCGGGCATCATGACGAGCAGGACCGAGATTTCAACTTTTGG 140906 Query 20812 CCCTTGTAGTGTA 20824 ||| ||||||||| Sbjct 140905 CCCGTGTAGTGTA 140893 >seq775 Length=133838 Score = 107 bits (118), Expect = 3e-19 Identities = 69/74 (93%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 20580 TGTATTTGATGCCTGcccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTCG 20639 ||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||| Sbjct 31586 TGTATATGATGCCTGTCCCCACGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC- 31528 Query 20640 GGGGCAGGCATCAA 20653 | |||||||||||| Sbjct 31527 GTGGCAGGCATCAA 31514 Score = 107 bits (118), Expect = 3e-19 Identities = 69/74 (93%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 18790 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggC 18849 |||||||||||| | |||||||||||||||||||||||||||||||||||||| |||| | Sbjct 31514 TTGATGCCTGCCAC-GACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCGTGGGGAC 31572 Query 18850 AGGCATCAAATACA 18863 |||||||| ||||| Sbjct 31573 AGGCATCATATACA 31586 Score = 102 bits (112), Expect = 1e-17 Identities = 69/75 (92%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 5215 TGTATTTGATGCCTGccccccccGACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 5274 ||||| ||||||||| |||| | ||||||||||||||||||||||||||||||||||||| Sbjct 31586 TGTATATGATGCCTGTCCCCAC-GACCAGCAGCACTCGCTTCGCTCGTGCCGCAAATGTC 31528 Query 5275 GGGGGCAGGCATCAA 5289 | |||||||||||| Sbjct 31527 -GTGGCAGGCATCAA 31514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 83269914323550