Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_006659.1 Length=41573 Score E Sequences producing significant alignments: (Bits) Value seq848 179 1e-40 seq237 161 3e-35 seq1104 107 5e-19 seq95 104 6e-18 seq1271 100 8e-17 seq49 95.1 3e-15 seq210 91.5 4e-14 seq157 91.5 4e-14 seq3975 87.8 5e-13 seq286 87.8 5e-13 seq156 84.2 6e-12 seq25 84.2 6e-12 seq518 82.4 2e-11 >seq848 Length=180487 Score = 179 bits (198), Expect = 1e-40 Identities = 160/196 (82%), Gaps = 12/196 (6%) Strand=Plus/Plus Query 13027 TTAACAAATATAAATAATGCTGTGAAGCGGGAAAGAATAGGAGTTACGGATA-ATTATTA 13085 || |||||| ||||||||||||||||||||||| ||| | ||||||||||| ||| ||| Sbjct 111199 TTTACAAATGAAAATAATGCTGTGAAGCGGGAAACAATGGAAGTTACGGATATATTTTTA 111258 Query 13086 CGTGAAGCGTTCCAACATTCACGTAACAGTATAATTGGT-AGGAAAGGATTGAGAAAGGA 13144 ||||||||||||| ||||||| ||||||| |||| ||| |||| |||| |||||| Sbjct 111259 CGTGAAGCGTTCC-ACATTCATGTAACAGGATAAAGGGTAAGGATAGGAAAGAGAAA--- 111314 Query 13145 TTGTGGAGAGGATCATCTTAATGTGAGTGTATAGAATATGTGAGAAAAAATTATTAGATA 13204 ||| |||||| |||||||| |||| ||||||||| | |||||||||| | |||| Sbjct 111315 ----GGAAAGGATCTTCTTAATGGGAGTTTATAGAATAAGCGAGAAAAAAT--TCGGATA 111368 Query 13205 GCTCGGACTAGGAATC 13220 ||||||||| ||| || Sbjct 111369 GCTCGGACTGGGATTC 111384 >seq237 Length=703356 Score = 161 bits (178), Expect = 3e-35 Identities = 142/172 (83%), Gaps = 5/172 (3%) Strand=Plus/Minus Query 13027 TTAACAAATATAAATAATGCTGTGAAGCGGGAAAGAATAGGAGTTACGGATA-ATTATTA 13085 || |||||| ||||||||||||||||||||||| ||| | ||||||||||| ||| ||| Sbjct 3381 TTTACAAATGAAAATAATGCTGTGAAGCGGGAAACAATGGAAGTTACGGATATATTTTTA 3322 Query 13086 CGTGAAGCGTTCCAACATTCACGTAACAGTATAATTGGT-AGGAAAGGATTGAGAAAGGA 13144 ||||||| ||||| |||||||| |||||| |||| ||| |||| |||| ||||||||| Sbjct 3321 CGTGAAGGGTTCC-ACATTCACCTAACAGGATAAAGGGTAAGGATAGGAAAGAGAAAGGA 3263 Query 13145 TTGTGGAGAGGATCATCTTAATGTGAGTGTATAGAATATGTGAGAAAAAATT 13196 | ||| |||| | |||||||| |||| |||| |||| | ||| ||||||| Sbjct 3262 --GAGGAAAGGACCTTCTTAATGAGAGTTTATAAAATAAGCGAGCAAAAATT 3213 >seq1104 Length=207343 Score = 107 bits (118), Expect = 5e-19 Identities = 97/121 (80%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGG 17819 ||||||||||||||| ||||||||||||||||||| | |||||||||||| || | | Sbjct 154851 AGCTTCCTATGATCTCAAAACGTCGAGATCTGATGAATACTCGATTTTTGAAAATCTGCC 154910 Query 17820 TAAAACCAATAACTTCCCGATTTTCG-AAAATCTTCAAtttttttAGCGGGAAGGTAAAA 17878 | ||| |||||||||||| ||||| | ||||| ||||| |||||| ||| |||| Sbjct 154911 TGAAATCAATAACTTCCCAATTTTTGAAAAATTAGTGGTTTTTATAGCGGAAAGACAAAA 154970 Query 17879 A 17879 | Sbjct 154971 A 154971 >seq95 Length=1238217 Score = 104 bits (114), Expect = 6e-18 Identities = 95/120 (79%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGG 17819 ||||||||||||||| ||||||||||||||||||| | |||||||||| || ||| Sbjct 253023 AGCTTCCTATGATCTCAAAACGTCGAGATCTGATGAATACTCGATTTTCAAAAATCGGCT 252964 Query 17820 TAAAACCAATAACTTCCCGATTTTCGAAAATCTTCAAtttttttAGCGGGAAGGTAAAAA 17879 | ||| |||||||||||| ||||| ||||| ||||| |||||| ||| ||||| Sbjct 252963 TGAAATCAATAACTTCCCAATTTTGAAAAATTAGTGGTTTTTGTAGCGGAAAGTCAAAAA 252904 >seq1271 Length=79403 Score = 100 bits (110), Expect = 8e-17 Identities = 106/135 (79%), Gaps = 10/135 (7%) Strand=Plus/Minus Query 13087 GTGAAGCGTTCCAACATTCACGTAACAGTATAATTGGTA-GGAAAGGATTGAGAAAGGAT 13145 ||||||||||||| |||||||||||||| || |||| || |||| ||||||||| Sbjct 76665 GTGAAGCGTTCCA-CATTCACGTAACAGGAT----GGTAAGGGTAGGAAAGAGAAAGGA- 76612 Query 13146 TGTGGAGAGGATCATCTTAATGTGAGTGTATAGAATATGTGAGAAAAAATTATTAGATAG 13205 | | | || | | |||||||| |||| ||||||||| | |||||||||| | ||||| Sbjct 76611 -GAGAAAAGTACCTTCTTAATGGGAGTTTATAGAATAAGCGAGAAAAAAT--TCGGATAG 76555 Query 13206 CTCGGACTAGGAATC 13220 |||||||| ||| || Sbjct 76554 CTCGGACTGGGATTC 76540 >seq49 Length=1330490 Score = 95.1 bits (104), Expect = 3e-15 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGG 17819 ||||||| ||||||| ||||||||||||||||||| | ||||||||| | || ||| Sbjct 1070161 AGCTTCCCATGATCTCAAAACGTCGAGATCTGATGAATTCTCGATTTTCGAAAATCGGTA 1070220 Query 17820 TAAAACCAATAACTTCCCGATTTTCGAAAATCTTCAAtttttttAGCGGGAAGGTAAAAA 17879 | ||| |||||||||||| ||||| ||||| ||||| ||||| ||| ||||| Sbjct 1070221 TCAAATCAATAACTTCCCAATTTTGAAAAATTAGTGGTTTTTACAGCGGAAAGTCAAAAA 1070280 >seq210 Length=752505 Score = 91.5 bits (100), Expect = 4e-14 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGG 17819 ||||||||||||||| ||||||||||||| ||| | | |||| ||||| | || ||| Sbjct 241569 AGCTTCCTATGATCTCAAAACGTCGAGATTTGACGAATACTCAATTTTCGAAAATCGGTA 241628 Query 17820 TAAAACCAATAACTTCCCGATTTTCGAAAATCTTCAAtttttttAGCGGGAAGGTAAAAA 17879 ||| |||||||||||| |||| ||||| | ||||| ||| |||||| ||||| Sbjct 241629 CTAAATCAATAACTTCCCAATTTCGAAAAATTTGTGGTTTTTATAGTGGGAAGTCAAAAA 241688 >seq157 Length=880853 Score = 91.5 bits (100), Expect = 4e-14 Identities = 94/121 (78%), Gaps = 4/121 (3%) Strand=Plus/Plus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGG 17819 ||||||||||||||| ||||||||||||||||||| | |||||||||| | || ||| Sbjct 778156 AGCTTCCTATGATCTCAAAACGTCGAGATCTGATGAATACTCGATTTTCGAAAATCGGCC 778215 Query 17820 TAAAACCAATAACTTCCCGATTTTCGAAAATCTTCAA--tttttttAGCGGGAAGGTAAA 17877 | ||| ||||||| | || ||||| |||| || | ||||| | |||| ||| ||| Sbjct 778216 TGAAATCAATAACATTCCAATTTT--GAAATATTAGAGGTTTTTATGGCGGAAAGTCAAA 778273 Query 17878 A 17878 | Sbjct 778274 A 778274 >seq3975 Length=8201 Score = 87.8 bits (96), Expect = 5e-13 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGG 17819 |||||||||| |||||||||||| ||||||||||| | |||| ||||| | || ||| Sbjct 3341 AGCTTCCTATTATCTTAAAACGTTGAGATCTGATGAATACTCAATTTTGGAAAATCGGTA 3400 Query 17820 TAAAACCAATAACTTCCCGATTTTCGAAAAT 17850 | ||| ||||||||| || ||||| ||||| Sbjct 3401 TGAAATCAATAACTTTCCAATTTTGAAAAAT 3431 >seq286 Length=2588622 Score = 87.8 bits (96), Expect = 5e-13 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 17764 TCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGGTAAA 17823 ||||||||||| ||||||||||||||||||| | ||| |||||| | || ||| | | Sbjct 2423745 TCCTATGATCTCAAAACGTCGAGATCTGATGAATACTTGATTTTCGAAAATCGGCCTGAC 2423686 Query 17824 ACCAATAACTTCCCGATTTTCGAAAATCTTCAAtttttttAGCGGGAAGGTAAAAA 17879 | ||||||||||| ||||| ||||| ||||| |||||| ||| ||||| Sbjct 2423685 ATCAATAACTTCCAAATTTTGAAAAATTAGTGGTTTTTGTAGCGGAAAGTCAAAAA 2423630 >seq156 Length=2104774 Score = 84.2 bits (92), Expect = 6e-12 Identities = 92/121 (76%), Gaps = 1/121 (1%) Strand=Plus/Plus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGG-G 17818 ||||||| ||||||| ||||| ||||||||||||| | |||||||||| || ||| Sbjct 1126799 AGCTTCCCATGATCTCAAAACTTCGAGATCTGATGAATACTCGATTTTCAAAAATCGGCC 1126858 Query 17819 GTAAAACCAATAACTTCCCGATTTTCGAAAATCTTCAAtttttttAGCGGGAAGGTAAAA 17878 |||| |||||||||||| ||||| ||||| |||| |||||| ||| |||| Sbjct 1126859 CGAAAATCAATAACTTCCCAATTTTGAAAAATTAGTGGTTTTGGTAGCGGAAAGTCAAAA 1126918 Query 17879 A 17879 | Sbjct 1126919 A 1126919 >seq25 Length=2050986 Score = 84.2 bits (92), Expect = 6e-12 Identities = 91/120 (76%), Gaps = 2/120 (2%) Strand=Plus/Minus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGG 17819 |||||| |||||||| |||||||||||| |||||| | |||||||||| | || ||| Sbjct 438043 AGCTTCATATGATCTCAAAACGTCGAGAACTGATGAATACTCGATTTTCGAAAATCGGCC 437984 Query 17820 TAAAACCAATAACTTCCCGATTTTCGAAAATCTTCAAtttttttAGCGGGAAGGTAAAAA 17879 | ||| ||||||| | | | ||| |||||| ||||| |||||| ||| ||||| Sbjct 437983 TGAAATCAATAACGTTC--AATTTTGAAAATTAGTGGTTTTTGTAGCGGAAAGTCAAAAA 437926 >seq518 Length=506962 Score = 82.4 bits (90), Expect = 2e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGG 17819 ||||||||||||||| |||||| |||||||||||| | |||||||||| | || ||| Sbjct 114328 AGCTTCCTATGATCTCAAAACGCCGAGATCTGATGAATACTCGATTTTCGAAAATCGGCC 114387 Query 17820 TAAAACCAATAACTT 17834 | ||| ||||||||| Sbjct 114388 TGAAATCAATAACTT 114402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132895468571580