Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_006662.1 Length=17477 Score E Sequences producing significant alignments: (Bits) Value seq1930 223 4e-54 seq30 172 6e-39 seq2323 163 3e-36 seq1651 156 5e-34 seq1257 134 2e-27 seq56 131 2e-26 seq1911 120 3e-23 seq1323 120 3e-23 seq791 118 1e-22 seq153 105 7e-19 seq775 102 9e-18 >seq1930 Length=43951 Score = 223 bits (246), Expect = 4e-54 Identities = 224/289 (78%), Gaps = 28/289 (10%) Strand=Plus/Plus Query 4745 TTAGAGAAATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGC 4804 || || |||||||||||||||| |||||||| |||||| ||| || | || ||||||| Sbjct 21161 TTGGAAAAATAGTATATTACACCACAAGGGCCGAAAGT-TGAATTTTCGGCCCTGCGCGT 21219 Query 4805 CAT-ATGCCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTC 4863 ||| |||||||| |||||||||||||||||||| | |||| | | | | |||| ||| Sbjct 21220 CATGATGCCCGAAGCGAAGCCGAGGGCATCATGACGAGCAGGACCGAGATTTCAACTTTT 21279 Query 4864 TGCCCATGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATT--- 4920 |||| |||||||||||| | ||||||| || ||||||||||||||||| |||| Sbjct 21280 GGCCCGTGTAGTGTATACGATTTTTCTTCATAGCCGGTCGAAAGTACGTTATTAATTTTA 21339 Query 4921 GCGTTGaaaa----aaa-----------------TTGATGCCTGCCCCCGACATTTGCGG 4959 | || | || ||| |||||||||| ||||||||||||||| Sbjct 21340 CCTTTTATAAGTTTAAATGTTGTTAAGCATGTTTTTGATGCCTG-CCCCGACATTTGCGG 21398 Query 4960 CACGAGCGAAGCGAGTGCTGCTGGTCggggggggCAGGCATCAAATACA 5008 |||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct 21399 CACGAGCGAAGCGAGTGCTGCTGGTC-GTGGGGGCAGGCATCAAATACA 21446 >seq30 Length=1964512 Score = 172 bits (190), Expect = 6e-39 Identities = 196/262 (75%), Gaps = 31/262 (12%) Strand=Plus/Minus Query 4752 AATAGTATA----TTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT 4807 ||||||||| |||||| |||||||| |||||| ||| || | || ||||||| | | Sbjct 1088066 AATAGTATACTTATTACACCACAAGGGCCGAAAGT-TGAATTTTCGGCCCTGCGCGTCGT 1088008 Query 4808 -ATGCCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGC 4866 ||||| ||||||||||||||||||||||| | |||| | | | | |||| ||| || Sbjct 1088007 GATGCCTGAGGCGAAGCCGAGGGCATCATGACGAGCAGGACCGAGATTTCAACTTTTGGC 1087948 Query 4867 CCATGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATT------ 4920 || |||||||||||| | ||||||| ||| ||||||||||||||||| |||| Sbjct 1087947 CCGTGTAGTGTATACGATTTTTCTTCATATCCGGTCGAAAGTACGTTATTAATTTTACTT 1087888 Query 4921 ------GCGTTGaa-----aaaa-------aTTGATGCCTGCCCCCGACATTTGCGGCAC 4962 | || || | || |||||||||| |||||||||||||||||| Sbjct 1087887 TTTTTAACTTTAAATATTGATAAGCATGTTTTTGATGCCTG-CCCCGACATTTGCGGCAC 1087829 Query 4963 GAGCGAAGCGAGTGCTGCTGGT 4984 |||||||||||||||||||||| Sbjct 1087828 GAGCGAAGCGAGTGCTGCTGGT 1087807 >seq2323 Length=23494 Score = 163 bits (180), Expect = 3e-36 Identities = 181/242 (75%), Gaps = 26/242 (11%) Strand=Plus/Plus Query 4751 AAATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-AT 4809 |||||||||||||||| |||||||| |||||| ||| || | | ||||||| ||| || Sbjct 20767 AAATAGTATATTACACCACAAGGGCCGAAAGT-TGAATTTTCGGTCCTGCGCGTCATGAT 20825 Query 4810 GCCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCA 4869 ||||||||||||||||||||||||||| | |||| | | | | |||| ||| ||| Sbjct 20826 GCCCGAGGCGAAGCCGAGGGCATCATGACGAGCAGGACCGAGATTTCAACTTTTAACCCG 20885 Query 4870 TGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATTGC------- 4922 |||||||||||| | ||||||| || ||||||||||||||||| |||| | Sbjct 20886 TGTAGTGTATACGATTTTTCTTCATAGCCGGTCGAAAGTACGTTATTAATTTCACTTTTT 20945 Query 4923 -----------GTTGaaaaaaa-----TTGATGCCTGCCCCCGACATTTGCGGCACGAGC 4966 ||||| || | |||||||||| |||||||||||||||||||||| Sbjct 20946 TAACTTTAAATGTTGATAAGCATGTTTTTGATGCCTG-CCCCGACATTTGCGGCACGAGC 21004 Query 4967 GA 4968 || Sbjct 21005 GA 21006 >seq1651 Length=83022 Score = 156 bits (172), Expect = 5e-34 Identities = 138/170 (81%), Gaps = 2/170 (1%) Strand=Plus/Minus Query 4752 AATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATG 4810 ||||||||||||||| |||||||| |||||| ||| || | || ||||||| || ||| Sbjct 70539 AATAGTATATTACACCACAAGGGCCGAAAGT-TGAATTTTCGGCCCTGCGCGTCAAGATG 70481 Query 4811 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 4870 |||||||||||||||||||||||||| | |||| | | | | |||| ||| |||| | Sbjct 70480 CCCGAGGCGAAGCCGAGGGCATCATGACGAGCAGGACCGAGATTTCAACTTTTGGCCCGT 70421 Query 4871 GTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATT 4920 ||||||||||| | ||||||| || ||||||||||||||||| |||| Sbjct 70420 GTAGTGTATACAATTTTTCTTCATAGCCGGTCGAAAGTACGTTATTAATT 70371 >seq1257 Length=119319 Score = 134 bits (148), Expect = 2e-27 Identities = 130/163 (80%), Gaps = 3/163 (2%) Strand=Plus/Plus Query 4752 AATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATG 4810 ||||||||||||||| |||||||| |||||| ||| || | || ||||||| ||| || Sbjct 54470 AATAGTATATTACACCACAAGGGCCGAAAGT-TGAATTTTCGGCCCTGCGCGTCATGATA 54528 Query 4811 CCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCAT 4870 ||||||||||||||||||||||||| || || | | | | | |||| ||| |||| | Sbjct 54529 CCCGAGGCGAAGCCGAGGGCATCATCACAAGCGGGACCGAGATTTCAACTTTTGGCCCGT 54588 Query 4871 GTAGTGTATACTAGTTTTCTTACTA-TGCGGTCGAAAGTACGT 4912 ||||||||||| | | ||||| || ||||||||||||||| Sbjct 54589 GTAGTGTATACGATTATTCTTCATACCTCGGTCGAAAGTACGT 54631 >seq56 Length=1279862 Score = 131 bits (144), Expect = 2e-26 Identities = 132/169 (78%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 4753 ATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATGC 4811 |||||||||||||| |||||||| |||||| ||| || | || |||||| ||| ||| Sbjct 1122828 ATAGTATATTACACCACAAGGGCCGAAAGT-TGAATTTTCGGCCCTGCGCCTCATGATGT 1122886 Query 4812 CCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATG 4871 ||||||||||||||||||||||||| |||| | | |||| ||| |||| || Sbjct 1122887 CCGAGGCGAAGCCGAGGGCATCATGAGGAGCAGGACCTATATTTCAACTTTTGGCCCGTG 1122946 Query 4872 TAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATT 4920 |||| ||||| | ||||||| || ||||||||||||||||| |||| Sbjct 1122947 TAGTATATACGATTTTTCTTCATAGCCGGTCGAAAGTACGTTATTAATT 1122995 >seq1911 Length=50175 Score = 120 bits (132), Expect = 3e-23 Identities = 129/167 (77%), Gaps = 3/167 (2%) Strand=Plus/Plus Query 4755 AGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCAT-ATGCCC 4813 |||||||||||| ||||||| |||||| ||| || | || |||||| ||| ||||| Sbjct 12177 AGTATATTACACCACAAGGGTCGAAAGT-TGAATTTTCGGCCTTGCGCGTCATGATGCCA 12235 Query 4814 GAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATGTA 4873 ||||||||||||||||||| ||| | |||| | | | | |||| ||| |||| |||| Sbjct 12236 GAGGCGAAGCCGAGGGCATTATGACGAGCAGGACTGAGATTTCAACTTTTGGCCCGTGTA 12295 Query 4874 GTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATT 4920 |||| || | ||||||| || |||| |||||||||||| |||| Sbjct 12296 GTGT-TAAGATTTTTCTTCATAGCCGGTTGAAAGTACGTTATTAATT 12341 >seq1323 Length=71642 Score = 120 bits (132), Expect = 3e-23 Identities = 132/178 (74%), Gaps = 26/178 (15%) Strand=Plus/Minus Query 4855 TCAAATTTCTGCCCATGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTA 4914 |||| ||| |||| |||||||||||| | ||||||| || ||||||||||||||||| Sbjct 2812 TCAACTTTTGGCCCGTGTAGTGTATACGATTTTTCTTCATAGCCGGTCGAAAGTACGTTA 2753 Query 4915 AAAATTGC-------------------GTTGaaaaaaaT-----TGATGCCTGCCCCCGA 4950 |||| ||||| || || ||||||||||| | || Sbjct 2752 TTAATTTTACTTTTTTTAACTTTAAATGTTGATAAGCATGTTTTTGATGCCTGCCTC-GA 2694 Query 4951 CATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCggggggggCAGGCATCAAATACA 5008 ||||||||||||||||||||| ||||||||||||| | |||||||||||||||||||| Sbjct 2693 CATTTGCGGCACGAGCGAAGCAAGTGCTGCTGGTC-GTGGGGGCAGGCATCAAATACA 2637 >seq791 Length=160919 Score = 118 bits (130), Expect = 1e-22 Identities = 194/283 (69%), Gaps = 39/283 (14%) Strand=Plus/Plus Query 4752 AATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCATATGC 4811 ||||||| ||||||| |||||||| |||||| ||| || | || |||| | | Sbjct 73810 AATAGTAGATTACACCACAAGGGCCGAAAGT-TGAATTTTCGGCCCTGCACTC------- 73861 Query 4812 CCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTGCCCATG 4871 ||| ||| |||||||||| | |||| | | | | |||| ||| |||| || Sbjct 73862 ----GGCTTCGCCTCGGGCATCATGACGAGCAGAACCGAGATTTCAACTTTTGGCCCGTG 73917 Query 4872 TAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATTGC--------- 4922 ||||||||| | ||||||| || ||||||| ||||||||| |||| Sbjct 73918 TAGTGTATATGACTTTTCTTCATAGCCGGTCGAGAGTACGTTATTAATTTTACTTTTTTT 73977 Query 4923 ----------GTTGaaaaaaaT-----TGATGCCTGCCCCCG--ACATTTGCGGCACGAG 4965 ||||| || || |||||||||| | |||||||||||||||| Sbjct 73978 AACTTTAAATGTTGATAAGCATGTTTTTGATGCCTGCATTTGCTACATTTGCGGCACGAG 74037 Query 4966 CGAAGCGAGTGCTGCTGGTCggggggggCAGGCATCAAATACA 5008 |||||||||||||||||||| | | ||||||||| |||||||| Sbjct 74038 CGAAGCGAGTGCTGCTGGTC-GTGAGGGCAGGCACCAAATACA 74079 >seq153 Length=995095 Score = 105 bits (116), Expect = 7e-19 Identities = 130/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Minus Query 4747 AGAGAAATAGTATATTACACTACAAGGGCAGAAAGTCTGAGATTCCTGCACTGCGCGCCA 4806 ||| ||||| |||||||||| |||||||| |||||| ||| || || |||| || || Sbjct 141024 AGAAAAATAATATATTACACCACAAGGGCCGAAAGT-TGAATTTTTGGCCCTGCTCGTCA 140966 Query 4807 T-ATGCCCGAGGCGAAGCCGAGGGCATCATGGCACGCAGTTCAGGGCTCTCAAATTTCTG 4865 | |||||| ||| || |||||||||| | |||| | | | | |||| ||| | Sbjct 140965 TGATGCCCTCGGCTTCACCTCGGGCATCATGACGAGCAGGACCGAGATTTCAACTTTTGG 140906 Query 4866 CCCATGTAGTGTATACTAGTTTTCTTACTATGCGGTCGAAAGTACGTTAAAAATT 4920 ||| ||||||||||| | ||||||| || |||| |||||||||||| |||| Sbjct 140905 CCCGTGTAGTGTATATGATTTTTCTTCATAACCGGTTGAAAGTACGTTATTAATT 140851 >seq775 Length=133838 Score = 102 bits (112), Expect = 9e-18 Identities = 69/75 (92%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 4934 TTGATGCCTGCCCCCGACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTCgggggggg 4993 |||||||||||| | ||||||||||||||||||||||||||||||||||||| | |||| Sbjct 31514 TTGATGCCTGCCAC-GACATTTGCGGCACGAGCGAAGCGAGTGCTGCTGGTC-GTGGGGA 31571 Query 4994 CAGGCATCAAATACA 5008 ||||||||| ||||| Sbjct 31572 CAGGCATCATATACA 31586 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 55801241337280