Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq349 167 2e-36 >seq349 Length=550016 Score = 167 bits (184), Expect = 2e-36 Identities = 539/833 (65%), Gaps = 12/833 (1%) Strand=Plus/Minus Query 21170 GACATAATTCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCT 21229 || |||| ||| ||| || || || | ||| | || ||||| || || || || || Sbjct 192974 GAAATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCA 192915 Query 21230 TCCAATGATATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAA 21289 || || ||| ||| ||||| || ||||| || ||| | || || | |||| Sbjct 192914 TCAGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACAA 192855 Query 21290 CCCAGTTCTGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAA 21349 || ||||| | | || || || || |||||||| ||||| || ||||| | | ||| Sbjct 192854 CCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAA 192795 Query 21350 TTCATACCGATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACG 21409 ||||| || || | |||| || | || | | || ||| || ||| |||| || Sbjct 192794 TTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACA 192735 Query 21410 GCTTCAACAATTATATTTATTATCCTAGATGTACTAGGGGGATACAATAATTGTTTA--- 21466 || || ||||||| || | || ||| ||| || | | || | | Sbjct 192734 GCATCTCGAATTATACCTACGA--CTCGATCCT-TAGACGGTTTCTGTACGAGATACGAG 192678 Query 21467 AACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAA 21526 |||| | || ||||| || ||||| || |||||||| ||| || ||||||||||| Sbjct 192677 AACAGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAG 192618 Query 21527 AATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCT-CC 21585 |||||||| || |||||||| |||| ||||||| ||| ||||| | ||| || ||| || Sbjct 192617 AATGTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAA-GCTGCC 192559 Query 21586 TGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTC 21645 || || || || || || || || || || || | | | ||| ||| ||||| | | Sbjct 192558 AGAGAAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTA-CTAC 192500 Query 21646 TTTATCCA--ATATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTA 21703 | | || | |||||| ||| ||||| | ||||| | || |||| | || Sbjct 192499 TCT-TCGAGTTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTC 192441 Query 21704 TCAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNN 21763 |||||||| || ||||| | ||||| | |||||| || Sbjct 192440 TCAATAGCATTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAAC 192381 Query 21764 NNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTT 21823 || |||||||| ||||| ||||| || || ||||| || || || ||||| || | | Sbjct 192380 ATGCTGTACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGT 192321 Query 21824 GCCTCTGAACATTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCA 21883 ||||||| ||||| || |||| || | | || ||||||||||||||| Sbjct 192320 GCCTCTGTTACCTGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCA 192261 Query 21884 TCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAAT 21943 || || || ||||| || | | | | ||| |||| | ||||||||| | | | Sbjct 192260 TCGGAAGCAGCGAAAAACGCGAGAACGTGTGATATGAAATGCCTTTCGTTATCAGAAAGT 192201 Query 21944 TTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAA 21996 || ||| | | ||| || |||||||| ||||| || || |||||||| Sbjct 192200 CTTACCCAGTGATCCATATCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAA 192148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531831160887760