Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq37 91.5 1e-13 seq365 86.0 5e-12 seq38 82.4 6e-11 >seq37 Length=1900120 Score = 91.5 bits (100), Expect = 1e-13 Identities = 104/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 112401 ACGTTGCCTAGGTCACCGACGTGTCGCTCGGCGGCGTCGGGTGCGCCATGGTCTTGGTTC 112460 ||||| || | ||| || | ||| || | || | | || || || || || || | ||| Sbjct 1333738 ACGTTCCCCAAGTCGCCAATGTGACGGTTGGAGTCCTCCGGAGCCCCGTGCTCCTTGTTG 1333679 Query 112461 GTGGGGTTAAAATGCTCGCCCGCCGACGTGCACCCGTTGCTAGTGTCGCCAAACTCGTGC 112520 |||||| ||||| | || || || ||||||||||| | |||||||||| ||||| Sbjct 1333678 TAGGGGTTGAAATGGGCTCCGGCTGAGATGCACCCGTTGGTGTTGTCGCCAAATTCGTGG 1333619 Query 112521 ACGTGAAAACCGTGCAACCC 112540 |||||||||||||| ||||| Sbjct 1333618 ACGTGAAAACCGTGTAACCC 1333599 >seq365 Length=450407 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 || ||||| |||||||| ||||| | || || || ||||| ||| | || || | Sbjct 426272 AACATGCAGATTTTTGTAAAAACTTTGACAGGTAAGACCATCACCCTTGAGGTTGAACCG 426331 Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402 || || | | | || ||| ||| || || |||||||| ||||| |||| Sbjct 426332 TCAGATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAAGAAGGTATCCCCCCTGAT 426391 Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462 |||||| | || |||| || || ||||| |||||||||| ||| | |||| ||| Sbjct 426392 CAGCAACGTCTAATTTTCGCTGGGAAACAGTTAGAAGATGGACGTACCTTATCCGACTAT 426451 Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| || || || || | ||| | ||||||||| | || || || Sbjct 426452 AACATTCAGAAGGAATCAACGCTTCATCTCGTGTTGAGACTCCGTGGTGG 426501 >seq38 Length=2283748 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 ||||||||| ||||||||||| | |||||||| ||||| ||| | || || | Sbjct 1209191 AATGCAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTC 1209250 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 ||| || ||| | || || ||||| || |||||||| | ||| ||||| Sbjct 1209251 CGATACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCA 1209310 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 |||| | ||||||| ||| ||||| || ||||||||| ||| | |||| || || Sbjct 1209311 GCAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAA 1209370 Query 115465 CATTCAAAAAGAGTCTAC 115482 || |||||||| || || Sbjct 1209371 TATCCAAAAAGAATCCAC 1209388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425289704040880