Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq38 109 4e-19 >seq38 Length=2283748 Score = 109 bits (120), Expect = 4e-19 Identities = 156/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 ||||||| |||| ||||| ||||| || ||||||||||| | || ||| ||||| Sbjct 1208491 AGTACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCCGTCC 1208432 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 ||||| |||||||| || | || | || ||| || || ||| | |||||||||||| Sbjct 1208431 TCCAACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTGTCC 1208372 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | |||||| |||||| || | |||||| | Sbjct 1208371 TGGATCTTGGC--CTTCACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATAG 1208314 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 |||| || ||||| || || || || ||||||||| || Sbjct 1208313 TTTTACCAGTCAGTGTCTTCACGAAGATCTGCATTCTG 1208276 Score = 84.2 bits (92), Expect = 2e-11 Identities = 158/232 (68%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || || || || | ||| |||| || || ||||| || ||||| || |||||||||| Sbjct 1209418 CCACCACGGAGACGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAA 1209359 Query 16769 ATGGTTTTGGCGTCC----TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCAC 16824 | ||| |||||| || | || ||||| ||| ||||||| || || || || Sbjct 1209358 AGGGT----GCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGG 1209303 Query 16825 AGGCACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTC 16884 || | || |||||||| |||| |||||| | | | || ||| || || Sbjct 1209302 GGGAATCCCTTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTC 1209243 Query 16885 CGTTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATT 16936 |||| ||||||||| ||||| |||| ||||||||||| || |||||| Sbjct 1209242 AACCTCCAAGGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCATT 1209191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405036289757260