Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq190 188 5e-43 seq747 147 1e-30 seq365 123 2e-23 seq38 122 6e-23 seq940 105 4e-18 seq233 102 5e-17 >seq190 Length=1749563 Score = 188 bits (208), Expect = 5e-43 Identities = 210/278 (76%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 6174 AACGTAAATCGTAATGTGGCGGACGCGTTCTACCGCTACAAAATGCCGCG-CATCTGCGC 6232 |||||||| | ||||| || | ||||| |||||||||||||| || | | || || Sbjct 78535 AACGTAAACAGAAATGTCAGCGATGTTTTCTATCGCTACAAAATGCCACGTCTTATG-GC 78593 Query 6233 CAAGGTCGAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGC 6292 ||| || || |||||||| || || || ||||| ||||| || || ||| |||| || || Sbjct 78594 CAAAGTAGAAGGTAAGGGTAATGGCATCAAAACTGTCATCGTTAATATGGCTGAGGTGGC 78653 Query 6293 TAAGGCGCTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGC 6352 |||||| ||||| | || |||| ||||| || || || || || ||||| | ||||| Sbjct 78654 TAAGGCCCTCGGCAGACCACCCACTTACCCCACCAAGTACTTTGGCTGCGAGTTGGGCGC 78713 Query 6353 TCAGACGCAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGC 6412 ||| || |||||||| |||||| || || ||||| ||||| || || ||| || | | Sbjct 78714 TCAAACCCAGTTTGACTTCAAAAATGAACGTTTCATTGTTAATGGTTCCCATGACGCCTC 78773 Query 6413 CAAGCTGCAGGACTTACTTGACGGCTTTATTCGCAAGT 6450 |||||||||||| | || || ||||| |||||||||| Sbjct 78774 CAAGCTGCAGGATCTTCTGGATGGCTTCATTCGCAAGT 78811 Score = 95.1 bits (104), Expect = 8e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 6450 TTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGAGCTTATTGTGTCTACCAAGAGA 6509 ||||| ||||| | |||||||| || || || ||||| || || ||||| || || Sbjct 79195 TTTGTCCTGTGCCCTGAATGCGACAATCCTGAAACCGATCTAATAGTGTCCCTAAAAAGG 79254 Query 6510 AACACCATCTCTCAGGGCTGCAAAGCGTGCGGTTACCATGGCAAGCTGGATTTATCACAC 6569 |||||||||||||||||||||||| ||||||||||| || ||| || | || Sbjct 79255 GGCACCATCTCTCAGGGCTGCAAAGCCTGCGGTTACCACGGACTGCTTGAATCCAACCAT 79314 Query 6570 AAACTCAACACCTTCATACTGAAGAATCCTCC 6601 ||||| || ||||| || ||||| ||||| Sbjct 79315 AAACTAGTAACGTTCATTCTCAAGAACCCTCC 79346 >seq747 Length=644639 Score = 147 bits (162), Expect = 1e-30 Identities = 170/229 (74%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||||||||||||||| ||||| ||||| || |||||| || || ||||| |||| Sbjct 453163 TACCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAG 453104 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 |||| |||| | || || | |||||| || || || || || ||||| ||||| | | Sbjct 453103 ACAATGTACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAG 453044 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || |||||||| ||||| |||||||| | || |||||| ||| | Sbjct 453043 GAATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGA 452984 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | |||| || |||||||| ||||| | |||||||||||| || ||||| Sbjct 452983 CCTCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCAT 452935 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || ||||| || || ||||| ||||| || |||||||| |||||||| ||||| Sbjct 462492 CCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAA 462551 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | | |||| | || || | |||||| || || || || | || |||||||| | || Sbjct 462552 AGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGA 462611 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| ||||||||| ||||| || || || | | || || | || || Sbjct 462612 ATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACC 462671 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || |||||||||||||| | |||||| ||||| || ||||| Sbjct 462672 TCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 || || ||||| || || ||||| ||||| || |||||||| |||||||| ||||| Sbjct 465968 CCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAA 466027 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | || | || |||| |||||| || || || || | || |||||||||| || Sbjct 466028 GGAGTGCGCCCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGA 466087 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | |||||||||||| ||||| || || || | | | || | || || Sbjct 466088 ATACCTTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACC 466147 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 |||| || || || |||||||| | |||||| ||||| || ||||| Sbjct 466148 TCTAGCGTGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 >seq365 Length=450407 Score = 123 bits (136), Expect = 2e-23 Identities = 157/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 38105 CAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTC 38164 |||||| | |||||| || ||||| ||||| || || || || || |||| | || Sbjct 426487 CAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGATAAGGTACGTCCATC 426428 Query 38165 GTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTC 38224 ||||| ||||| || || || ||||| ||||| ||||| | ||||| ||||||||||| Sbjct 426427 TTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGGATACCTTCTTTGTC 426368 Query 38225 CATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGT 38284 || ||| || ||||||| || |||||| |||||| || | || || || Sbjct 426367 TTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACCTCAAGGGTGATGGT 426308 Query 38285 TTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320 ||||| ||||| ||||| || || ||||||||||| Sbjct 426307 CTTACCTGTCAAAGTTTTTACAAAAATCTGCATGTT 426272 >seq38 Length=2283748 Score = 122 bits (134), Expect = 6e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||||| ||||| |||||||| ||||| || ||||| || || | Sbjct 1208736 TACCACCACGTAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGG 1208677 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | ||| | || |||| || || ||||| || || || ||||| ||||| | | Sbjct 1208676 AAAGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAG 1208617 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| ||||| ||| ||||||| || || || ||| | Sbjct 1208616 GAATCCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGA 1208557 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318 |||| || || || ||||| |||||||||||||||||||| ||||||||| Sbjct 1208556 CTTCCAAAGTGATGGTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCATG 1208507 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||||| ||||| ||||| ||| || ||||| |||||||| || || Sbjct 1209418 CCACCACGGAGACGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAA 1209359 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 | ||| | || |||| || || |||||||| || || ||||| ||||| | ||| Sbjct 1209358 AGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGA 1209299 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||||||||||| ||||| |||||| |||| | ||||| |||||| Sbjct 1209298 ATCCCTTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAACC 1209239 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || || || || |||||||||||||| || || || ||||| Sbjct 1209238 TCCAAGGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | | ||| | |||||| ||||| || || || |||||||| || || | Sbjct 1208964 TACCACCACGAAGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGG 1208905 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | | || | || |||| ||||| |||||||| || || ||||| || || | || Sbjct 1208904 AGAGAGTGCGACCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGG 1208845 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | ||||||||||| |||||| |||||| || | | |||||| ||| | Sbjct 1208844 GAATCCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGA 1208785 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || || || || || || |||||||||||||| || || |||||||| Sbjct 1208784 CCTCCAAGGTGATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 100 bits (110), Expect = 2e-16 Identities = 162/232 (70%), Gaps = 1/232 (0%) Strand=Plus/Minus Query 38086 CATTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAAT 38145 |||| ||||| | | ||| | ||||| ||||| ||| || ||||| |||||||| | Sbjct 1209194 CATT-CCACCACGGAGACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGT 1209136 Query 38146 CAGACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGG 38205 |||| | ||| | || |||| || || |||||||| || || ||||| || || | Sbjct 1209135 CAGAAAGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTG 1209076 Query 38206 AGGGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTT 38265 ||| | || || ||||| ||||| ||| || |||| | ||||| || Sbjct 1209075 GGGGAATCCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTT 1209016 Query 38266 CAACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | ||||| | || || || || |||||||||||||| ||||| |||||||| Sbjct 1209015 CGACTTCCAGAGTGATGGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 38091 CCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGAC 38150 ||||| | | ||| | ||||| || | ||| ||||| || || ||||| || ||| Sbjct 1208506 CCACCACGGAGACGGAGTACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 1208447 Query 38151 AAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGG 38210 || ||| |||| || || ||||| ||||| || || | | || ||||||| ||| Sbjct 1208446 AAGGTACGCCCGTCCTCCAACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGG 1208387 Query 38211 ACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAACT 38270 | ||| ||||||||| || || |||||| |||| || || || || || Sbjct 1208386 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCACC 1208327 Query 38271 TCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || | || ||||||||||| |||| || |||||||| |||||||| Sbjct 1208326 TCGAGGGTGATAGTTTTACCAGTCAGTGTCTTCACGAAGATCTGCAT 1208280 >seq940 Length=105884 Score = 105 bits (116), Expect = 4e-18 Identities = 73/83 (88%), Gaps = 5/83 (6%) Strand=Plus/Minus Query 25914 ttGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGTTAATCCTTTCAT 25968 ||||| |||||||||||||||||| | ||||| || |||||||||||||| ||||| Sbjct 1012 TTGGCAGTGGTTTCGCTAGATAGTGGGTAGGGACAGTGGGAATCTCGTTAATCCATTCAT 953 Query 25969 GCGCGTCACTAATTAGATGACGA 25991 ||||||||||||||||||||||| Sbjct 952 GCGCGTCACTAATTAGATGACGA 930 >seq233 Length=1369072 Score = 102 bits (112), Expect = 5e-17 Identities = 164/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 |||| ||||| ||| |||| |||||||||||||| || || || || | ||| |||| Sbjct 301354 TACCTCCTCTTAAAAGCAATACCAAATGAAGAGTAGAGTCATTCTGGATGTAGTAGTCAG 301413 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATC-GGAG 38207 |||| ||||| || | | |||||| || ||||| || ||| |||| ||||| |||| Sbjct 301414 ACAATGTGCGTTCATCTTTAAGTTGTTTACCAGCAAAAATCAGGTGTTGCTGATCTGGAG 301473 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGC-TTCACATTCTGGACAGTATCTCCACTTTC 38266 | | || || | | | |||| || |||||||| | || |||||| ||| Sbjct 301474 GAATCTCC--CTATAGC--TGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGATTC 301529 Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 ||||||| || ||||| || ||||| | |||||| |||| || ||||| Sbjct 301530 GACTTCTACCGTGATAGTCTTTCCCGTGAGGGTTTTTACGATAATTTGCAT 301580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334904443361894