Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq38 156 4e-33 seq365 120 3e-22 seq747 111 1e-19 seq233 86.0 5e-12 >seq38 Length=2283748 Score = 156 bits (172), Expect = 4e-33 Identities = 164/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || |||||||| || ||||| || || ||||||| | || || || |||| Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || ||||| || ||||| | |||| ||| ||||||||||||||||| || ||||| Sbjct 1208796 GATACTATTGAAAACGTGAAGGCCAAAATTCAA-GACAAAGAAGGGATTCCCCCAGACCA 1208854 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || ||||||||||||||||||| ||||||||| ||||||| | ||| || || Sbjct 1208855 GCAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAA 1208914 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 |||||| |||||||| || || || || ||||| Sbjct 1208915 TATTCAGAAAGAATCGACCCTTCACTTGGTGCT 1208947 Score = 145 bits (160), Expect = 7e-30 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| ||||| || || ||||| || || ||||||| | || || || |||| Sbjct 1209191 AATGCAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTC 1209250 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || || || ||| ||||| |||||| ||||||||||||||||| || || || Sbjct 1209251 CGATACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCA 1209310 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || |||||||||||||||| || ||||||||| ||||| | ||| ||||| Sbjct 1209311 GCAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAA 1209370 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||| |||||||||||||| || || || || || Sbjct 1209371 TATCCAAAAAGAATCCACCCTTCACTTGGTTCT 1209403 Score = 129 bits (142), Expect = 5e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || ||||| || ||||| || || ||||||| | ||||| || | || Sbjct 1208964 ATGCAGATCTTCGTAAAAACCTTGACGGGAAAGACCATCACTCTGGAAGTCGAACCATCC 1209023 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 || || || ||| | ||| |||||| ||||| || |||||||| || ||||| Sbjct 1209024 GATACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAGGAGGGGATTCCCCCAGACCAG 1209083 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || |||||||||||||||| || ||||||||| ||||| | || |||||| Sbjct 1209084 CAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCTGACTACAAT 1209143 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227 || |||||||||||||| || || || || ||| | || | || |||| Sbjct 1209144 ATCCAAAAAGAATCCACCCTTCACTTGGTTCTACGTCTCCGTGGTGGAA 1209192 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || ||||| || ||| ||||||| | ||||| || | ||| Sbjct 1208508 ATGCAGATCTTCGTGAAAACCTTGACGGGGAAAACCATCACTTTGGAAGTCGAACCATCT 1208567 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| |||||| ||||||||||||||||| || || || Sbjct 1208568 GACACCATCGAGAATGTCAAGGCCAAAATCCAAGACAAAGAAGGGATTCCTCCGGATCAG 1208627 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 || || ||||||| |||||||| || ||||||||| ||||| | ||| || ||| Sbjct 1208628 CAACGTCTTATTTTCGCCGGCAAGCAGCTAGAAGATGGACGCACACTTTCCGACTATAAT 1208687 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || ||||| || || || || || || Sbjct 1208688 ATCCAGAAGGAATCTACTCTTCACTTGGTTCT 1208719 Score = 109 bits (120), Expect = 5e-19 Identities = 143/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 |||||| || || || ||||| |||| |||||| | ||||| |||| |||||| |||| Sbjct 1208279 AATGCAGATCTTCGTGAAGACACTGACTGGTAAAACTATCACCCTCGAGGTGGAGCCGTC 1208338 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| |||||| ||||| || ||| |||||||| || || || || || || Sbjct 1208339 CGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGATCA 1208398 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | || || ||||||||||| || || || | || || || || ||||| Sbjct 1208399 GCAGAGGTTGATCTTCGCCGGCAAACAGTTGGAGGACGGGCGTACCTTGTCGGACTACAA 1208458 Query 25178 TATTCAAAAAGAATCCAC 25195 || || || |||||||| Sbjct 1208459 CATCCAGAAGGAATCCAC 1208476 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || || || ||||||| || ||||||| | ||||| || | ||| Sbjct 1209420 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACTTTGGAAGTCGAACCATCT 1209479 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| ||||| |||| |||||| ||||| || |||||||| || || || Sbjct 1209480 GACACCATCGAAAATGTGAAAGCGAAAATCCAAGACAAGGAGGGGATTCCCCCAGATCAG 1209539 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||| || | || ||||||||||| || | ||||| | ||| || | ||| || || Sbjct 1209540 CAGAGGTTGATCTTTGCCGGCAAGCAGCTGGAAGACGGTCGTACCCTTTCCGACTATAAC 1209599 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || ||||| ||| ||||||| Sbjct 1209600 ATTCAGAAGGAGTCGACGCTCCATCTAGTGCT 1209631 >seq365 Length=450407 Score = 120 bits (132), Expect = 3e-22 Identities = 161/221 (73%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || |||||||| |||||||| ||||| ||||||| | || || || |||| Sbjct 426275 ATGCAGATTTTTGTAAAAACTTTGACAGGTAAGACCATCACCCTTGAGGTTGAACCGTCA 426334 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 || || |||||| | || ||||||| | || ||||||||||| || || ||||| Sbjct 426335 GATACCATCGAG--AATGTCAAAGCAAAGATCCAA-GACAAAGAAGGTATCCCCCCTGAT 426391 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 || || || | ||||| || || ||||| |||||||||| || || | ||| || Sbjct 426392 CAGCAACGTCTAATTTTCGCTGGGAAACAGTTAGAAGATGGACGTACCTTATCCGACTAT 426451 Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || ||||| || ||||| ||||| ||| | ||| | || || Sbjct 426452 AACATTCAGAAGGAATCAACGCTTCATCTCGTGTTGAGACT 426492 >seq747 Length=644639 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || ||||| || | || ||||| ||||||| | || || ||| | ||| Sbjct 466194 ATGCAAATTTTCGTAAAAACCCTAACGGGTAAGACCATCACGCTAGAGGTCGAGCCTTCT 466135 Query 25059 GACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||| | || || | | |||| |||| || ||||||||||| ||||| || || || Sbjct 466134 GACCCAATAGAAAACGTTAAAGCTAAAATCCAG-GACAAAGAAGGTATTCCTCCCGATCA 466076 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || || |||||| ||||||||| |||||| || ||||| Sbjct 466075 ACAGCGTTTGATCTTCGCGGGTAAACAACTAGAAGATGGGCGCACTCCTTCTGACTACAA 466016 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| ||||| ||||| || || || || || || || | || || || Sbjct 466015 TATCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTTGAGGGGCGG 465968 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24980 ATTTGTACAAAACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCAC 25039 |||| | |||||| ||||||||||| || || || || | || || ||| | ||||| Sbjct 452916 ATTTTCAGAAAACGCCACAATGCAAATTTTCGTGAAAACCCTCACGGGGAAAACTATCAC 452975 Query 25040 AGTCGAAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGA 25099 | || || || | ||||| |||||||| |||| |||||| |||||||| Sbjct 452976 GCTAGAGGTCGAACCATCTGATACTATCGAAAATGTGAAAGCTAAAATCCAAGACAAAGA 453035 Query 25100 AGGGATTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG 25159 |||||||| || || || || || | || || || || |||||| | ||||||| || Sbjct 453036 GGGGATTCCTCCAGATCAGCAACGTCTGATCTTCGCTGGTAAACAACTTGAAGATGGACG 453095 Query 25160 CACTGTGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGT 25207 || || || ||||| || || || || || || || || || || Sbjct 453096 TACATTGTCTGACTACAACATCCAGAAGGAGTCTACCCTTCACTTGGT 453143 >seq233 Length=1369072 Score = 86.0 bits (94), Expect = 5e-12 Identities = 165/241 (68%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 24985 TACAAAACGGAACAATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCG 25044 || |||||| ||||||||||| | ||||| || | || || || | ||||| || | Sbjct 301594 TATAAAACGCCACAATGCAAATTATCGTAAAAACCCTCACGGGAAAGACTATCACGGTAG 301535 Query 25045 AAGTGGAGTCGTCTGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGA 25104 |||| || || ||||| |||||||| |||| |||||| | | | || | || Sbjct 301534 AAGTCGAATCATCTGATACTATCGAAAATGTGAAAGCTAAAATC-CAGCTATAG-GGAGA 301477 Query 25105 TTCCACCTGACCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTG 25164 |||| || || || || | | |||||||| || |||||| | ||||||| ||||| Sbjct 301476 TTCCTCCAGATCAGCAACACCTGATTTTTGCTGGTAAACAACTTAAAGATGAACGCACAT 301417 Query 25165 TGGGCGATTACAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAG 25224 || || ||| | || || || || || || || ||||| || | ||||||||| Sbjct 301416 TGTCTGACTACTACATCCAGAATGACTCTACTCTTCATTTGGTATTGCTTTTAAGAGGAG 301357 Query 25225 G 25225 | Sbjct 301356 G 301356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433272684868310