Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_008953.1 Length=3935 Score E Sequences producing significant alignments: (Bits) Value seq93 80.6 7e-12 seq95 77.0 8e-11 >seq93 Length=1858283 Score = 80.6 bits (88), Expect = 7e-12 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 3366 ATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCAT 3425 ||| || || |||||||| ||||||||||| ||| | |||| |||| | || || | Sbjct 820936 ATGCACATTCCACAAATATGGTCCTTCGGGATCCATACAAAAACACGACGCGCTGTGTGT 820995 Query 3426 CCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTT 3479 || | ||| | |||||||||||||||| |||||||| ||||||||||| Sbjct 820996 ACTTGCTCTCAACATTCTCAACGAGAAGATCTATATTTTCCTTTGGTTCTGGTT 821049 >seq95 Length=1238217 Score = 77.0 bits (84), Expect = 8e-11 Identities = 86/115 (75%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 3366 ATGTACTTTTCACAAATACGGTCCTTCGGGCTCCCTGGAAAACTACGAGGGACTCTGCAT 3425 ||| || || ||||||||||||||||| || || || | || | ||| || |||||| | Sbjct 1029624 ATGCACCTTCCACAAATACGGTCCTTCTGGGTCGGTGCAGAAGTTCGACGGGCTCTGCGT 1029683 Query 3426 CCTCCCGGAGAACGTGGTCAACGAGAAGATCTACATTTTCCTCTGGTTCTGGTTC 3480 || || || | |||||||| || || ||| | ||||| |||||||||||| Sbjct 1029684 GCTGCCCCTAAATATCGTCAACGAAAAAATTTACGTGTTCCTGTGGTTCTGGTTC 1029738 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12478570299000