Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_008993.1 Length=5530 Score E Sequences producing significant alignments: (Bits) Value seq101 82.4 3e-12 seq167 78.8 3e-11 >seq101 Length=1672674 Score = 82.4 bits (90), Expect = 3e-12 Identities = 78/100 (78%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 3970 GGGCCGCTGCGCTAAACGAAGTTGCCACATTCCGGCTACGTCGGGTAGAAAAATAGTGTA 4029 ||||||||||||||||| || ||| | ||||||| | ||| | | |||||| || | Sbjct 1635786 GGGCCGCTGCGCTAAACAAAATTGATCCTTTCCGGCGCCATCGAGCAAAAAAATTGTACA 1635845 Query 4030 CATACCTCGGCCAGAAAAAAGTAAAGCCTCAGACCACATG 4069 || ||||||| || ||||| ||||||||||| |||||| Sbjct 1635846 CACACCTCGGAAAGTAAAAAAGAAAGCCTCAGATCACATG 1635885 >seq167 Length=793021 Score = 78.8 bits (86), Expect = 3e-11 Identities = 78/101 (77%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 3970 GGGCCGCTGCGCTAAACGAAGTTGCCACATTCCGGCTACGTCGGGTAGAAAAATAGTGTA 4029 || |||||||||||||| || ||| | ||||||| | ||| | | |||||| || | Sbjct 209882 GGACCGCTGCGCTAAACAAAATTGATCCTTTCCGGCGCCATCGAGCAAAAAAATTGTACA 209823 Query 4030 CATACCTCGGCCAGAAAAAAGTAAAGCCTCAGACCACATGT 4070 || ||||||| || ||||| ||||||||||| ||||||| Sbjct 209822 CACACCTCGGAAAGTAAAAAAGAAAGCCTCAGATCACATGT 209782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 17581985587950