Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq365 127 2e-24 seq747 120 3e-22 seq38 118 9e-22 >seq365 Length=450407 Score = 127 bits (140), Expect = 2e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| |||||||| || | ||| | ||| ||||| || |||||||| || ||| Sbjct 426501 CCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGAT 426442 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||||| |||||| | ||||| |||||| | || ||||| || || || || || Sbjct 426441 AAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGG 426382 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || ||||||||||| |||||| ||| | | || | ||| || | | ||| || Sbjct 426381 ATACCTTCTTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACC 426322 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | ||| | || || || |||| |||||||||||||||||||||| Sbjct 426321 TCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATG 426274 >seq747 Length=644639 Score = 120 bits (132), Expect = 3e-22 Identities = 156/213 (73%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 114171 AAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCT 114230 ||||| || || | || ||||| ||||| || ||||| || | |||||| |||| Sbjct 462507 AAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAAGAGTACGTCCATCT 462566 Query 114231 TCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCG 114290 ||||||||||| || ||| |||| | ||||||||| || ||||||||||| |||||||| Sbjct 462567 TCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCTTTGTCC 462626 Query 114291 GCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 || ||| | |||| | | ||| | ||||| | | ||||| || | || | || Sbjct 462627 TGGAT-TTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACCTCTAGCGTGATAGT 462685 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || || || |||||||| ||||| ||||| Sbjct 462686 TTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114152 AATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC 114211 |||||| || | | | ||| || || || | ||||| || || || |||||||| || Sbjct 453165 AATACCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTC 453106 Query 114212 GCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGG 114271 || ||||| |||||||||||||||||||||| |||| ||||| || || || || Sbjct 453105 AGACAATGTACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGG 453046 Query 114272 AGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTC 114331 |||||| || |||||||| || || ||| | | ||| | || || | | ||| Sbjct 453045 AGGAATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTC 452986 Query 114332 GACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 ||| || | || | ||||| || || || ||||| || ||||| ||||| Sbjct 452985 GACCTCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCAT 452935 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 114171 AAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCT 114230 ||||| || || | || ||||| ||||| || ||||| || ||| || |||| Sbjct 465983 AAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGCCCATCT 466042 Query 114231 TCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCG 114290 || ||||||||||| ||| |||| | ||||||||| || |||||||| ||||||||||| Sbjct 466043 TCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCTTTGTCC 466102 Query 114291 GCAATCTTTTGTTTTAGC-TGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGT 114349 || ||| | |||| | | ||| | | ||| | | ||||| || | || | || Sbjct 466103 TGGAT-TTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTGATGGT 466161 Query 114350 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || || || |||||||| ||||| ||||| Sbjct 466162 CTTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 >seq38 Length=2283748 Score = 118 bits (130), Expect = 9e-22 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || || || | || |||||||| ||||| || || ||| Sbjct 1208965 ATACCACCACGAAGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCG 1208906 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | ||| ||| |||||| || ||||| || || | || || || || ||||| || Sbjct 1208905 GAGAGAGTGCGACCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGG 1208846 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| ||| || || | | ||||| || |||| | |||| Sbjct 1208845 GGAATCCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCG 1208786 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || ||||| |||| ||||||||||| |||||||| Sbjct 1208785 ACCTCCAAGGTGATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 105 bits (116), Expect = 6e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| |||||||| | || ||| || || | |||||||| || || || || || ||| Sbjct 1208737 ATACCACCACGTAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCG 1208678 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| || || || || ||| | || ||||| || || |||||| Sbjct 1208677 GAAAGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGA 1208618 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| || || || | | || | |||||| | | |||| Sbjct 1208617 GGAATCCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCG 1208558 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | ||||| || |||| ||||| || || ||||||||| Sbjct 1208557 ACTTCCAAAGTGATGGTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCATG 1208507 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| |||| | |||| ||| | ||| || || || |||||||| || ||| Sbjct 1209646 CCTCCACGGAGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAA 1209587 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | |||||| ||||| || || || || || |||| | | ||| || || || ||| Sbjct 1209586 AGGGTACGACCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 1209527 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || || ||||| || || ||| | | ||| | |||||| | | |||||| Sbjct 1209526 ATCCCCTCCTTGTCTTGGATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGACT 1209467 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 |||| || | || ||||||||||| ||||| || || ||||||||| Sbjct 1209466 TCCAAAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATG 1209419 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | || ||| || || | || ||||||||||| || ||||| ||| Sbjct 1209421 ATGCCACCACGGAGACGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCG 1209362 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| || || || || || | || ||||| || || || || Sbjct 1209361 GAAAGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGG 1209302 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| ||||||||||| || || || | | |||| ||| |||| | ||| Sbjct 1209301 GGAATCCCTTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCA 1209242 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| ||| | || || || |||| ||||| ||||| || ||||| Sbjct 1209241 ACCTCCAAGGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| || || | || ||||||||||| || ||||| || Sbjct 1209193 ATTCCACCACGGAGACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCA 1209134 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || |||||| || || || || || | || ||||| || ||||| || Sbjct 1209133 GAAAGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGG 1209074 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||| || || ||||| || || || | | |||| ||| |||| | |||| Sbjct 1209073 GGAATCCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCG 1209014 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || |||| |||||||| || |||||||| Sbjct 1209013 ACTTCCAGAGTGATGGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420080769056088