Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq339 132 4e-26 >seq339 Length=1584805 Score = 132 bits (146), Expect = 4e-26 Identities = 241/348 (69%), Gaps = 6/348 (2%) Strand=Plus/Plus Query 20240 CCAGTAACATGAGCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACT 20299 || |||||||| || | ||||||||| | || | |||||| ||||| ||||| || ||| Sbjct 1111435 CCTGTAACATGTGCTATCATATAAGTAAGCAGCGCATAGCTTGCAATATTAAACGGTACT 1111494 Query 20300 CCCAAACCCATGTCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACA 20359 || ||||||||||| |||| || ||||| | |||||| || |||||| ||| || ||| Sbjct 1111495 CCTAAACCCATGTCGGCCGATCTTTGATATAACTGACAAGACAGCTCATCGTTTGCGACA 1111554 Query 20360 TAAAATTG-ACATAACAAGTGACAGGGCGGAAGCGCCA--TCAACGACAAGTCCGCCGGG 20416 || || || || ||| || || || || | |||| ||| || | || | || Sbjct 1111555 TAGAACTGTACGAGGCAA-TGGCATGGAGGTAAAGCCATTTCAGGGATA--TCGACAGGA 1111611 Query 20417 TTCCACGCACACATAATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATG 20476 ||||| |||||||| || || | ||| || | || | |||| ||| || | || Sbjct 1111612 TTCCAAGCACACATTATTATACGTCTGTCATTTGGTCTTGTTTTAATTGTATTTATAACA 1111671 Query 20477 TACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCC 20536 | | ||| || || | || | | | || |||| || | || || | || Sbjct 1111672 TGAGCCAACTGATCGATACCTTTATTTTTGTAATCAGTATGCATATCTTTATATTCAGCA 1111731 Query 20537 CCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCC 20584 ||||| ||||||||||||||||| |||| ||| || ||||| |||||| Sbjct 1111732 CCAAAATGCCTCCACTGGAAACCATAAATAGGCCCTAAATCACCCTCC 1111779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441315013266160