Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq38 143 3e-29 seq365 122 9e-23 seq747 95.1 1e-14 seq37 86.0 6e-12 >seq38 Length=2283748 Score = 143 bits (158), Expect = 3e-29 Identities = 170/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | || |||||||||||| | |||||| || || |||||||| || || | Sbjct 1209646 CCTCCACGGAGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAA 1209587 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || ||||||| ||||||||||||||| | || | || |||||| || || ||| Sbjct 1209586 AGGGTACGACCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGA 1209527 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || || || || ||||| | |||| ||||| ||| || | || ||| | || || Sbjct 1209526 ATCCCCTCCTTGTCTTGGA-TTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGAC 1209468 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| | ||| | |||||||||||||| ||||| ||||| || ||||| Sbjct 1209467 TTCCAAAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 1209420 Score = 136 bits (150), Expect = 4e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||||||||| || ||||| || | | |||||| | ||||| |||||| Sbjct 1209166 TGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCCATCTTCTAGCTGC 1209107 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||||||| |||| || || |||||||| || ||||| || || || ||||| ||||| Sbjct 1209106 TTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTTGTCTTGGATTTTG 1209047 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || ||| | ||||| | || ||||| | ||| | |||||| || ||| Sbjct 1209046 GCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAGAGTGATGGTCTTTCCCGTC 1208987 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 || ||||||||||| || ||||| Sbjct 1208986 AAGGTTTTTACGAAGATCTGCAT 1208964 Score = 131 bits (144), Expect = 2e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| | |||| ||||||||||| ||||| || || || | || ||||| | ||| Sbjct 1208947 AGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCT 1208888 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||| ||||||||| |||| || || |||||||| || ||||| |||||||| ||| Sbjct 1208887 TCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCT 1208828 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| || || | ||||| | || || || | || | |||| Sbjct 1208827 TGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTC 1208768 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||||| |||||||| || || ||||| Sbjct 1208767 TTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 129 bits (142), Expect = 6e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||||||||| || ||||| || | | |||||| | ||||| |||||| Sbjct 1209394 TGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATCTTCTAGCTGC 1209335 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||||||| |||| || || ||||| || || ||||| |||||||| ||||| ||||| Sbjct 1209334 TTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTTGTCTTGGATTTTG 1209275 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| || ||| | ||||| | || || || | || | |||||| || ||| Sbjct 1209274 GCCTTCACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGTGATGGTCTTTCCCGTC 1209215 Query 64421 AAAGTTTTTACGAAAATTTGCATT 64444 || ||||| || || ||||||||| Sbjct 1209214 AAGGTTTTGACAAAGATTTGCATT 1209191 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| || || || || || || | | ||||| | ||||| |||||| Sbjct 1208710 TGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTGCGTCCATCTTCTAGCTGC 1208651 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 |||||||| |||| || || ||||| || |||||||| |||||||| ||||| ||||| Sbjct 1208650 TTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTGGATTTTG 1208591 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 ||| ||| ||| | || ||| | || ||||| | ||| | ||| || || ||| Sbjct 1208590 GCCTTGACATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTTTTCCCCGTC 1208531 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 || ||||| ||||| || ||||| Sbjct 1208530 AAGGTTTTCACGAAGATCTGCAT 1208508 >seq365 Length=450407 Score = 122 bits (134), Expect = 9e-23 Identities = 167/231 (72%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 || || || | ||| | ||| ||||||| ||| ||||| || |||||||| || || | Sbjct 426501 CCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGAT 426442 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||| || | ||||| | ||| || || || |||| || || ||||| || || || Sbjct 426441 AAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGG 426382 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395 || |||||||| ||||| || ||| ||||| ||| ||| | ||||| | || || Sbjct 426381 ATACCTTCTTTGTCTTGGATCTTT-GCTTTGACATTCTCGATGGTATCTGACGGTTCAAC 426323 Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 || | || | |||||| || |||||||||||||| ||||| ||||| || Sbjct 426322 CTCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATGTT 426272 >seq747 Length=644639 Score = 95.1 bits (104), Expect = 1e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||| || ||||| || | |||||| | ||||| || || Sbjct 465992 TGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGCCCATCTTCTAGTTGT 466051 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | || | ||||| || ||||||||||| |||||||| || || | |||| Sbjct 466052 TTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCTTTGTCCTGGA-TTTT 466110 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| || || | || ||| | || || |||| || | |||||| || || Sbjct 466111 AGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTGATGGTCTTACCCGT 466170 Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443 | |||||||||||||||||||| Sbjct 466171 TAGGGTTTTTACGAAAATTTGCAT 466194 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || || || || || |||||||| || | | || || | |||||||| || Sbjct 453137 TGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAATGTACGTCCATCTTCAAGTTGT 453078 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 || || || | || || || ||||| || |||||||| || ||||| ||||| ||||| Sbjct 453077 TTACCAGCGAAGATCAGACGTTGCTGATCTGGAGGAATCCCCTCTTTGTCTTGGATTTTA 453018 Query 64361 TGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 ||||| ||| || | |||||| | || || |||| || | || || || || Sbjct 453017 -GCTTTCACATTTTCGATAGTATCAGATGGTTCGACCTCTAGCGTGATAGTTTTCCCCGT 452959 Query 64420 CAAAGTTTTTACGAAAATTTGCATT 64444 | ||||| ||||||||||||||| Sbjct 452958 GAGGGTTTTCACGAAAATTTGCATT 452934 Score = 86.0 bits (94), Expect = 6e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || ||||| ||||| || ||||| || | | || || | |||||||| || Sbjct 462516 TGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAAGAGTACGTCCATCTTCAAGTTGT 462575 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||| || | || | ||||| || || |||||||| || ||||| || || ||||| Sbjct 462576 TTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCTTTGTCCTGGATTTTA 462635 Query 64361 TGCTTTA-CAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGT 64419 |||||| | || | ||| ||| | || || |||| || | || || || || Sbjct 462636 -GCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACCTCTAGCGTGATAGTTTTACCCGT 462694 Query 64420 CAAAGTTTTTACGAAAATTTGCAT 64443 | |||||||||||||||||||| Sbjct 462695 GAGGGTTTTTACGAAAATTTGCAT 462718 >seq37 Length=1900120 Score = 86.0 bits (94), Expect = 6e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 115367 CACGGTTTTCATGTTCACGAATTCGGCGACACTAGCAACGGCTGCACGTCCGCCGGCGAG 115426 ||||||||||| || |||||||| ||||||| | |||||| |||| || ||||| | Sbjct 1333605 CACGGTTTTCACGTCCACGAATTTGGCGACAACACCAACGGGTGCATCTCAGCCGGAGCC 1333664 Query 115427 CATTTCAACCCGTTTAACCAAGATCACGGCGCACCGAACGCACCCGTCCGCCACGTCGGT 115486 ||||||||||| | ||| | || ||||| || ||| | | || ||| ||| | || Sbjct 1333665 CATTTCAACCCCTACAACAAGGAGCACGGGGCTCCGGAGGACTCCAACCGTCACATTGGC 1333724 Query 115487 GATCTGGGCAACGTCGA 115503 || |||| ||||| || Sbjct 1333725 GACTTGGGGAACGTAGA 1333741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499579384004560