Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq747 129 4e-25 seq38 109 4e-19 seq365 107 1e-18 >seq747 Length=644639 Score = 129 bits (142), Expect = 4e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 ||| || | ||| | |||||| || |||||||| || || ||||| || ||||| || Sbjct 465967 GCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGA 466026 Query 15009 GAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGG 15068 || | | | | ||||||| |||||| || ||| | |||||||||||||| ||| || Sbjct 466027 AGGAGTGCGCCCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGG 466086 Query 15069 AATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTAC 15128 ||| ||||| ||||| ||||| ||| || ||||||| | || | || || Sbjct 466087 AATACCTTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGAC 466146 Query 15129 GTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 |||| || ||||| ||||| || || |||||||| |||||||||||| Sbjct 466147 CTCTAGCGTGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCATA 466195 Score = 127 bits (140), Expect = 1e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 14948 TGCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGC 15007 |||| || | ||| | |||||| || |||||||| || || ||||| || ||||| || Sbjct 462490 TGCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAG 462549 Query 15008 TGAGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 ||| | | | ||||| | ||||||||| ||| | |||||||||||||| || | Sbjct 462550 AAAGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAG 462609 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || || ||||| ||||| ||| || ||||||| || || | || | Sbjct 462610 GAATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGA 462669 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | |||| || || |||||||| || || |||||||| |||||||||||| Sbjct 462670 CCTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCATA 462719 Score = 111 bits (122), Expect = 1e-19 Identities = 163/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| ||| | || || || ||||||||||| || || || |||||||| || | Sbjct 453161 CCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCA--G 453104 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| || | ||||| | |||||| |||||| | |||| ||| || || || | Sbjct 453103 ACAATGTACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAG 453044 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| || || ||||| ||||| ||| ||| |||| |||||||| ||| | Sbjct 453043 GAATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGA 452984 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 | |||| || || ||||| || || || ||||| || ||||||||||| Sbjct 452983 CCTCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCAT 452935 >seq38 Length=2283748 Score = 109 bits (120), Expect = 4e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCT 15027 || || |||||||| || ||||| || || || || ||| |||| | | | |||||| Sbjct 1208944 ACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTCT 1208885 Query 15028 AATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAA 15087 | |||||||| || | || | || || ||||| ||||| ||||| ||||| | Sbjct 1208884 AGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTGA 1208825 Query 15088 ATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTA 15147 |||||| || || |||| ||||||||| ||| || || ||||| ||||| || Sbjct 1208824 ATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTCTTG 1208765 Query 15148 CCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || |||| ||||||||||| || |||||| Sbjct 1208764 CCCGTCAAGGTTTTTACAAAGATCTGCATA 1208735 >seq365 Length=450407 Score = 107 bits (118), Expect = 1e-18 Identities = 167/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 14949 GCCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCT 15008 |||||| || | ||| || || | |||||| || || || || || ||||| || ||| Sbjct 426502 GCCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCG-- 426445 Query 15009 GAGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTT 15066 || || || | |||||||| ||||| |||||| | || | ||| || || || Sbjct 426444 GATAAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGG 426385 Query 15067 GGAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTC 15125 || || ||||| ||||| || |||||||| ||| | || || ||||| ||| Sbjct 426384 GGGATACCTTCTTTGTCTTGGATCTTTGCTTTG-ACATTCTCGATGGTATCTGACGGTTC 426326 Query 15126 TACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15179 || || | ||| ||||| |||||||||| ||||||||||||||| ||||| || Sbjct 426325 AACCTCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATGTT 426272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357346378241090