Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq38 114 1e-20 seq747 104 2e-17 seq365 100 3e-16 seq1096 86.0 6e-12 >seq38 Length=2283748 Score = 114 bits (126), Expect = 1e-20 Identities = 166/233 (71%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 126882 CTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAAT 126941 |||| || || || | ||| | ||| | ||| | ||| ||||| || ||||| || || | Sbjct 1209650 CTGC-CCTCCACGGAGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGT 1209592 Query 126942 CGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGG 127001 || | || ||| || || ||||| || || || ||||||| | ||||||||| | Sbjct 1209591 CGGAAAGGGTACGACCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTG 1209532 Query 127002 GAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCT 127061 | || || ||||||||||| ||||||| || | | ||||| |||||| | | Sbjct 1209531 GGGGAATCCCCTCCTTGTCTTGGATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTT 1209472 Query 127062 CGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||||||| | || | || ||||||||||| ||||| || || ||||||||| Sbjct 1209471 CGACTTCCAAAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCATG 1209419 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | ||||| || | || || || || || || ||||| || | Sbjct 1208506 CCACCACGGAGACGGAGTACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 1208447 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | || || || || | |||||| || ||| ||||||| | ||||||||||||||| Sbjct 1208446 AAGGTACGCCCGTCCTCCAACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGG 1208387 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 |||||||| |||||| ||| || ||| | | |||| |||||| | ||| || Sbjct 1208386 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCACC 1208327 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||| ||| | ||||| || ||||| || || || || |||||||| Sbjct 1208326 TCGAGGGTGATAGTTTTACCAGTCAGTGTCTTCACGAAGATCTGCAT 1208280 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 ||||| || | || | |||||| || | || || ||||| |||||||| || ||| Sbjct 1208962 CCACCACGAAGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAG 1208903 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | |||||| ||| ||||||||||| || || | || | ||| ||||| || || || Sbjct 1208902 AGAGTGCGACCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGA 1208843 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 || || || ||||| ||||| ||| | | ||| | || || | ||||| Sbjct 1208842 ATCCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACC 1208783 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || | ||| | || ||||| |||| ||||||||||| |||||||| Sbjct 1208782 TCCAAGGTGATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 |||||| || | || | ||||| || | || || |||||||| |||||||| || Sbjct 1209191 TCCACCACGGAGACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGA 1209132 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | ||||| ||| |||||||| || || || | || | || ||||| || || || Sbjct 1209131 AAGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGG 1209072 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || ||||||||||| |||||| ||||| | || | ||| || | ||||| Sbjct 1209071 AATCCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGAC 1209012 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 ||| | || | || || || |||| |||||||| || |||||||| Sbjct 1209011 TTCCAGAGTGATGGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 >seq747 Length=644639 Score = 104 bits (114), Expect = 2e-17 Identities = 157/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 126896 AATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGA 126955 || || || ||||| || | || || || ||||| |||||||| || ||||| Sbjct 465977 AACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGC 466036 Query 126956 GAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCC 127015 ||| ||||| ||||| || ||| ||||||| ||||| ||||||||||| || || || Sbjct 466037 CCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCT 466096 Query 127016 TTGTCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGG 127073 |||||| |||||| |||| | ||| ||| | | ||| | | |||||| || | | Sbjct 466097 TTGTCCTGGATTTT-AGCTTTAACGTT-TTCTATTGGGTCAGAAGGCTCGACCTCTAGCG 466154 Query 127074 TCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 | | || || || || || |||||||| ||||| ||||| Sbjct 466155 TGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 >seq365 Length=450407 Score = 100 bits (110), Expect = 3e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || |||||| | ||| | ||| || || || ||||| || || ||| Sbjct 426504 GCGCCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCG 426445 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || || ||| |||| |||||| |||||| | || | || |||||||| || Sbjct 426444 GATAAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGG 426385 Query 127004 GGTATGCCCTCCTTGTCCGTGATTTTCTGCTT-GAGTTGTTCGACGGTGTCCGTACTCTC 127062 || || || || ||||| ||| || ||||| || | |||| ||| || | || Sbjct 426384 GGGATACCTTCTTTGTCTTGGATCTT-TGCTTTGACATTCTCGATGGTATCTGACGGTTC 426326 Query 127063 GACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || || | ||| | || || || |||| |||||||||||||||||||||| Sbjct 426325 AACCTCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATG 426274 >seq1096 Length=295351 Score = 86.0 bits (94), Expect = 6e-12 Identities = 172/252 (68%), Gaps = 10/252 (4%) Strand=Plus/Minus Query 147310 AGGAAACACGAACACATTTGGGGACGACACGTGCCCGCCGCAAACAGCGTGGGGCTGGCG 147369 || ||||| ||| ||| ||| || | || ||||| | ||| | || || || ||| Sbjct 67364 AGAAAACAAGAAGACAATTGAGGTCTGGGAGTACCCGCGGAAAATAAAGTTGGACTTGCG 67305 Query 147370 TGCGTGAA----CGTGCCCAGACTCATCAATTGATACGTTTCAATGGCGCTCATAACGTC 147425 || ||||| | | || | | ||| | ||| ||||| || ||| | ||| Sbjct 67304 TGTGTGAAATATCTTTCCGATAA----CAAATTATAAGTTTCTATAGCGGCGTCTATGTC 67249 Query 147426 ATCGCCGTGAATGGCCAGGGCGACGCGCATGAGCATGTGCTGGGGTCGTTCCGCAATCAC 147485 || || ||||| ||| ||||| | ||||||||||||||| || ||||| ||||| Sbjct 67248 TTCCCCATGAATTCCCACAGCGACTCTCATGAGCATGTGCTGAGGGCGTTCAACAATCTT 67189 Query 147486 GTCATTGACTTTTAATAGATATCCATTGGTC-AGAGTTTTGAAACCAAAGTACTTGTAGT 147544 | |||| ||| | ||||| | | || |||||||||||||| ||||| |||||| Sbjct 67188 CCCGTTGATTTTGAGCAGATA-GGAACGCTCAAGAGTTTTGAAACCGAAGTAATTGTAGG 67130 Query 147545 CGTAGTCCCTGT 147556 | ||||||||| Sbjct 67129 AGAAGTCCCTGT 67118 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475438545057760