Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq1096 230 2e-55 seq365 122 8e-23 seq747 118 1e-21 seq37 98.7 9e-16 seq38 91.5 1e-13 >seq1096 Length=295351 Score = 230 bits (254), Expect = 2e-55 Identities = 1138/1801 (63%), Gaps = 23/1801 (1%) Strand=Plus/Plus Query 122886 AAAATCGAGGAAAAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGC 122945 |||||| | | ||| | | ||||| ||| || ||||||||| | |||||| | || Sbjct 67177 AAAATCAACGGGAAGATTGTTGAACGCCCTCAGCACATGCTCATGAGAGTCGCTGTGGGA 67236 Query 122946 GTGCACGGACGCGACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTT 123005 | || || ||||| || ||| | |||||||| ||||| | || ||| || | Sbjct 67237 ATTCATGGGGAAGACATAGACGCCGCTATAGAAACTTATAATTTGTTATCGGAAAGATAT 67296 Query 123006 TTCACGCACGCGAGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCG 123065 ||||| ||||| ||||| ||||| || |||| || || ||||| |||||||| Sbjct 67297 TTCACACACGCAAGTCCAACTTTATTTTCCGCGGGTACTCCCAGACCTCAATTGTCTTCT 67356 Query 123066 TGTTTTTTGCTCACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAA--CTTTGCGCG 123123 |||||| | || | ||| || || || || ||||| | | || | | |||| Sbjct 67357 TGTTTTCTTCTAATGATGCCAGACGATAGTATTGAGGGTATTT-TCAACTGCCTGGCGCA 67415 Query 123124 ATTGCGCGTTGATTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAG 123183 || |||| | ||||| || | | || || || || || ||||| ||| | | |||| Sbjct 67416 AT-GCGCTTATATTTCTAAGTCAGCGGGAGGTATTGGTGTCAACGTTCACAATATCAGAG 67474 Query 123184 GCCGCGGAAGCCGCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGC 123243 | |||| || | |||| |||| | | ||| || | | | |||||| Sbjct 67475 CCAAAGGAACATATATTGCAGGCACTAACGGTGTGTCGAACGGTCTAGTACCTATGCTGA 67534 Query 123244 GAGTTTACAATAACGCCGTGCGGCACGTCGACCAGGGCGGCAA---ACGCAAAGGCGCGA 123300 |||| |||| | | | || | |||||||| || ||||| ||| ||| ||| Sbjct 67535 AGGTTTTTAATAGCACGGCAAGGTATGTCGACCAAGGAGGCAATAAACGACCAGGAGCGT 67594 Query 123301 TGGCGATCTATCTAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCA 123360 | || || || ||||||||||||| | |||||| | ||| || | |||||||| | Sbjct 67595 TTGCAATATACTTAGAACCGTGGCATGCTGATGTCTTCGAGTTCCTTAATTTAAAGAAGA 67654 Query 123361 ACATGGGGGCGGAAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATT 123420 ||| || ||||||| | ||| | ||||| || || || || ||| | || |||| Sbjct 67655 ACACTGGCAAGGAAGAATACCGAGCAAGAGATTTATTTTATGCATTGTGGATCCCAGATT 67714 Query 123421 TGTTTATGCGACGCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTC 123480 |||| ||| ||| ||| | | || || ||||| || |||||||| | | || Sbjct 67715 TGTTCATGAAACGAGTAGATTCAAATGGTGTTTGGTCTCTTATGTGTCCTCACATGGCTC 67774 Query 123481 CCGGCTTGAGCGACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCG 123540 | || | ||| || || | | ||||| | | |||| | | || ||| | Sbjct 67775 CGGGTCTTTCCGATTGTTGGGGAGAAGAATTTGAGAAACTCTACGAGAAGTATGAGAATG 67834 Query 123541 AAGGCAAACAGGTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACAC 123600 | || || | | | || || | || | || | | ||| |||||| | | | | Sbjct 67835 AGGGGAATTACATCAAACAAGTACAAGCTAGGGAACTTTGGAAAGCTATTATTGTATCCC 67894 Query 123601 AAGTCGAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATC 123660 |||| ||||| || || || || ||| | |||||||| ||||| || || || | ||| | Sbjct 67895 AAGTTGAAACTGGCACTCCTTATATGTTGTACAAAGATGCCTGTAATAGAAAGAGCAACC 67954 Query 123661 -AGAGCAACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGC 123719 | || | ||| || || || ||| |||||||| | ||| | ||||| |||||||| | Sbjct 67955 AACAGAATCTT-GGTACCATCAAAAGTAGTAATTTATGCACGGAAATCATCGAATATACT 68013 Query 123720 GATGCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAA 123779 | || || | || || || ||||| |||||||| ||| ||| | |||| | Sbjct 68014 TCACCGGACGAAATCGCAGTATGCAATTTAGCTTCGATAGCCGTCAATATGTTCGTCAAG 68073 Query 123780 AACGGC------GCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAG 123833 || | ||| | || | | | | ||| ||| || ||| |||||| | Sbjct 68074 GCCGACAGGAAAACTTACGACTTTGATATGTTGAAAGACATCACCAAA---TTAGTAACG 68130 Query 123834 ---AATTTGAACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCT 123890 || | | ||||| || || || || | |||||| | |||||||| || Sbjct 68131 AGAAACCTCGATAAAATAATAGACGTGAACTACTATCCTGTTAAGGAAGCGGAAAATTCA 68190 Query 123891 AATTTGAAACACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATG 123950 ||| |||||||| | ||| | || | ||||| || || || || || || | Sbjct 68191 AATAGTCGCCACAGACCCATAGGAATCGGGGTACAAGGTTTAGCAGATGCATTCATACTC 68250 Query 123951 CTGCGCATGCCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACA 124010 || || ||||| | || ||||| ||||||| ||||| |||| || ||| ||| || Sbjct 68251 CTACGGATGCCTTTTGACAGCGAAGAAGCAAGTTTGCTCAATAAACAGATATTCGAGACG 68310 Query 124011 ATTTATTACGGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAA 124070 ||||| || | || | || || || || ||| | || || | ||| | || Sbjct 68311 ATTTACTATGCTGCGCTCGAAGCAAGTTGTGAAATAGCAGAACAAAAGGGCACTTATTCG 68370 Query 124071 AGTTACGCGGGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACA 124130 |||| || || || | ||| ||| || || ||||| ||||||||| | | ||| Sbjct 68371 TCTTACAATGGTAGTCCCGTTAGCAAAGGGATCTTACAGTATGACATGTGGGACGTTACG 68430 Query 124131 CCGACAAATTTGTGGGACTGGAGCGTTTTAAAACAACGCATATCGACGCACGGTTTGCGT 124190 || || | | ||||| ||| | | ||| || ||| ||| ||||| | | Sbjct 68431 CCTACCAGCCTTTGGGATTGGGCAGCACTGAAAGAAAAGATAGCGAAACACGGCGTTAGG 68490 Query 124191 AACTCGCTGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAAC 124250 |||||||| | | || |||||||| || |||||||||| || | |||||||| Sbjct 68491 AACTCGCTACTTTTAGCACCTATGCCGACAGCTTCCACTGCTCAGATCCTTGGAAACAAT 68550 Query 124251 GAATCCTTCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTT 124310 |||||| | || || | ||| || | ||| || || || ||| | ||||| || Sbjct 68551 GAATCCATTGAACCTTACACCTCAAACATTTACACCCGTCGGGTCTTATCGGGCGAATTC 68610 Query 124311 CAAGTGATAAATCATCATTTGGTGGACGACTTGGTGGCGTTAAATTTGTACGATGAAAAC 124370 ||| | | || || |||||| | | |||||| | | | ||| ||||||| Sbjct 68611 CAAATAGTCAACCACCATTTGCTCAAAGACTTGACAGAGCGAGGCCTGTGGGATGAAACG 68670 Query 124371 ATGCGCAACGAAATTATTGCGGCCGGTGGCAGCGTGCAGCGCATCGCTTCGATTCCGGAA 124430 ||| || |||| | || | | || | ||| | || || ||||| ||| Sbjct 68671 ATGAAAAATCAAATCTTAGCCAACTGCGGTTCTATCCAGAACGTCCCTGATATTCCTGAA 68730 Query 124431 CACGTC-AAGCAACTGTACAAAACCGTGTGGGAAATGAAAAATAAACGATTAATTGAAAT 124489 || || |||| | | ||||| || || ||||| || | ||| | | | || Sbjct 68731 GACCTCAAAGCTA-TTTACAAGACGGTCTGGGAGATTTCGCAGAAAGTGATCCTCAATAT 68789 Query 124490 GGCCGTCGACCGAGGCGCGTACACGGATCAAAGTCAATCTTTTAACGTGTTTGTAGCGGA 124549 ||||| ||| || || || | || ||||| ||||| ||| ||| | || | | Sbjct 68790 GGCCGCCGATCGTGGGGCCTTCATTGATCAGAGTCAGAGTTTGAACATTCACGTCGAAAA 68849 Query 124550 ACCCACCTACGCCCGCATGACCAGCATACACATGCACGCGTGGAGCAGCGGACTCAAAAC 124609 ||| || || | | | | || ||| | ||| ||| ||| || || || || Sbjct 68850 ACCAACATATGGTGTCCTCTCGTCGATGCACTTCTACGGCTGGCGCAAGGGGCTTAAGAC 68909 Query 124610 GGGCATGTATTACTTAAGAACCAAACCGGCGGCCGATGCCATTCAATTTACCGTCGACAA 124669 |||||||| || || ||||| ||||| || ||| | | || || |||||||| ||||| Sbjct 68910 AGGCATGTACTATTTGAGAACAAAACCCGCTGCCAAACCGATCCAGTTTACCGTGGACAA 68969 Query 124670 A 124670 | Sbjct 68970 A 68970 >seq365 Length=450407 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173 || || ||||| |||||||| ||||| |||||||||||||| || || ||||| ||| Sbjct 426501 CCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGAT 426442 Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233 | ||| ||| || || ||||| || ||| | || | |||||||| || || || Sbjct 426441 AAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGG 426382 Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACT 45293 || |||||||| ||||| || ||| ||||| || | ||| || || | || || Sbjct 426381 ATACCTTCTTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACC 426322 Query 45294 TCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | || || || || | ||||||||||||||| ||||| Sbjct 426321 TCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCAT 426275 >seq747 Length=644639 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || |||||||||||||||||||| || || | || ||| || | |||| Sbjct 462516 TGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAAGAGTACGTCCATCTTCAAGTTGT 462575 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || |||||| | ||||| || || || || || |||||||| ||||| || || ||||| Sbjct 462576 TTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCTTTGTCCTGGATTTTA 462635 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 ||| | ||||| ||||| |||| |||||| || || || | ||||| || || Sbjct 462636 GCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACCTCTAGCGTGATAGTTTTACCCGTG 462695 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 || |||||||| ||||||||||| Sbjct 462696 AGGGTTTTTACGAAAATTTGCAT 462718 Score = 113 bits (124), Expect = 4e-20 Identities = 149/205 (73%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGTCCAATT 45195 || || |||||||||||||||||||| || || || || | | ||| || | || Sbjct 465992 TGAAGGGTTGATTCCTTTTGGATATTGTAGTCA--GAAGGAGTGCGCCCATCTTCTAGTT 466049 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 |||| || ||| | ||||| || || || || || ||||| |||||||| || || |||| Sbjct 466050 GTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCTTTGTCCTGGATTT 466109 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 | ||| | ||||| | ||| |||| |||||| || || || | || || || | Sbjct 466110 TAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTGATGGTCTTACCCG 466169 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 |||| |||||||| ||||||||||| Sbjct 466170 TTAGGGTTTTTACGAAAATTTGCAT 466194 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244 ||| || | |||||| || ||| | |||| |||||||| || || ||||| || ||||| Sbjct 453090 ATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGGAATCCCCTCTTT 453031 Query 45245 ATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304 ||||| ||||| ||| | ||| | || || || | ||||| || || || | Sbjct 453030 GTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGACCTCTAGCGTGAT 452971 Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || || ||||| || ||||||||||| Sbjct 452970 AGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCAT 452935 >seq37 Length=1900120 Score = 98.7 bits (108), Expect = 9e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 102356 AGCTTCAACGTTTCCCAAGTCGCCGACGTGCCGTATGATTGAATCGGGCGCACCATGATC 102415 ||| || ||||| ||||||||||| | ||| || || || || || || || || Sbjct 1333745 AGCCTCTACGTTCCCCAAGTCGCCAATGTGACGGTTGGAGTCCTCCGGAGCCCCGTGCTC 1333686 Query 102416 CATGTTGAACGGATTGAAATGTTCGCCGGCCGAGGTGCATCCGTTGCTCATGTCTCCGAA 102475 | ||||| | || |||||||| | ||||| ||| |||| |||||| | |||| || || Sbjct 1333685 CTTGTTGTAGGGGTTGAAATGGGCTCCGGCTGAGATGCACCCGTTGGTGTTGTCGCCAAA 1333626 Query 102476 TTCGTGAACGTGAAAGCCGTGCAAACCTT 102504 |||||| |||||||| ||||| || |||| Sbjct 1333625 TTCGTGGACGTGAAAACCGTGTAACCCTT 1333597 >seq38 Length=2283748 Score = 91.5 bits (100), Expect = 1e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGT 45197 || || || ||||| || || |||||||| ||| || || | ||| || | ||| Sbjct 1208938 TGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTCTAGCTGT 1208879 Query 45198 TTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTT 45257 || || || | || | |||||||||||| || ||||| |||||||| ||||||||||| Sbjct 1208878 TTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTGAATTTTG 1208819 Query 45258 TGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTT 45317 || | ||| | || ||||| | ||||| || | || | || ||||| || Sbjct 1208818 GCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTCTTGCCCGTC 1208759 Query 45318 AGAGTTTTTACAAAAATTTGCAT 45340 | ||||||||||| || ||||| Sbjct 1208758 AAGGTTTTTACAAAGATCTGCAT 1208736 Score = 89.7 bits (98), Expect = 5e-13 Identities = 144/205 (70%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 45138 TGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAG--AATCGTCCAATT 45195 || || || |||||||| ||||||||||| ||| || || | | ||| || | | Sbjct 1208710 TGAAGAGTAGATTCCTTCTGGATATTATAGTCG--GAAAGTGTGCGTCCATCTTCTAGCT 1208653 Query 45196 GTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTT 45255 | || || ||| | || | |||||||| ||||| ||||| |||||||| ||||| |||| Sbjct 1208652 GCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTGGATTT 1208593 Query 45256 TTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGG 45315 | |||| || | |||||| || | |||||||| | ||| | ||||| || | Sbjct 1208592 TGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTTTTCCCCG 1208533 Query 45316 TTAGAGTTTTTACAAAAATTTGCAT 45340 | | ||||| || || || ||||| Sbjct 1208532 TCAAGGTTTTCACGAAGATCTGCAT 1208508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451944021481040