Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq747 141 2e-28 seq38 118 2e-21 >seq747 Length=644639 Score = 141 bits (156), Expect = 2e-28 Identities = 154/202 (76%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || |||||||| |||| ||||||||||| ||| || | ||||||||| || || Sbjct 453138 GTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAATGTACGTCCATCTTCAAGTTG 453079 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || |||||||| ||||| ||||| || ||| ||| || ||| || || || || Sbjct 453078 TTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGGAATCCCCTCTTTGTCTTGGAT-TT 453020 Query 199546 TTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 | || ||||| ||||| || || | || ||| || || | |||||| || || |||| Sbjct 453019 TAGCTTTCACATTTTCGATAGTATCAGATGGTTCGACCTCTAGCGTGATAGTTTTCCCCG 452960 Query 199605 TGAGAGTTTTCACAAAAATTTG 199626 |||| |||||||| |||||||| Sbjct 452959 TGAGGGTTTTCACGAAAATTTG 452938 Score = 123 bits (136), Expect = 6e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || || |||||||||| |||||||||| | ||| | ||||||||| || || Sbjct 462515 GTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAAGAGTACGTCCATCTTCAAGTTG 462574 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || |||||||| | |||||| || || ||| ||| || ||| ||||| || || Sbjct 462575 TTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCTTTGTCCTGGAT-TT 462633 Query 199546 TTGCTTCA-CGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 | |||| | || ||| | ||||| | | || || || | |||||| || ||||||| Sbjct 462634 TAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACCTCTAGCGTGATAGTTTTACCCG 462693 Query 199605 TGAGAGTTTTCACAAAAATTTG 199626 |||| ||||| || |||||||| Sbjct 462694 TGAGGGTTTTTACGAAAATTTG 462715 Score = 114 bits (126), Expect = 3e-20 Identities = 148/202 (73%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || || |||||||||| |||||||||| ||| | |||||||| || || Sbjct 465991 GTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGCCCATCTTCTAGTTG 466050 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || |||||||| | |||||| || || ||| ||| |||||| ||||| || || Sbjct 466051 TTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCTTTGTCCTGGAT-TT 466109 Query 199546 TTGCTTCA-CGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 | |||| | || ||| | | ||| | | || || || | |||||| |||||||||| Sbjct 466110 TAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTGATGGTCTTACCCG 466169 Query 199605 TGAGAGTTTTCACAAAAATTTG 199626 | || ||||| || |||||||| Sbjct 466170 TTAGGGTTTTTACGAAAATTTG 466191 >seq38 Length=2283748 Score = 118 bits (130), Expect = 2e-21 Identities = 159/219 (73%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || |||| || || || ||||| ||||||||||| || | ||| ||||| | | || Sbjct 1209640 CGGAGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAAAGGGTA 1209581 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || |||||||||||||| ||||| ||||| | | |||||| || || ||| || Sbjct 1209580 CGACCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATCCCC 1209521 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || || || ||| || ||||| ||||| |||||| | || ||| || ||||| Sbjct 1209520 TCCTTGTCTTGGAT-TTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGACTTCCAA 1209462 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || |||||||| || || || Sbjct 1209461 AGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTG 1209423 Score = 98.7 bits (108), Expect = 2e-15 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 199433 GTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCG 199492 || || ||||| |||| ||||||||| | ||| || | || || |||| ||| || ||| Sbjct 1208476 GTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCCGTCCTCCAACTGTTTGCCG 1208417 Query 199493 GCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTC 199552 |||||||| | | |||||| || ||| || || ||| ||||| ||||| |||| Sbjct 1208416 GCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTGTCCTGGATCTTGGCCTTC 1208357 Query 199553 ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTT 199612 ||| |||| |||||| | | || || || | ||||| || ||||| || || || Sbjct 1208356 ACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATAGTTTTACCAGTCAGTGTC 1208297 Query 199613 TTCACAAAAATTTG 199626 ||||| || || || Sbjct 1208296 TTCACGAAGATCTG 1208283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178763390931758