Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq38 125 8e-24 seq747 102 9e-17 >seq38 Length=2283748 Score = 125 bits (138), Expect = 8e-24 Identities = 159/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444 |||| ||||| || ||||| ||||| |||||||| || | || ||| |||| || Sbjct 1208488 ACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCCGTCCTCC 1208429 Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504 | ||| ||||||||||| ||||| | |||||| |||| || | || ||| |||||| | Sbjct 1208428 AACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTGTCCTGG 1208369 Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564 ||||| ||| | || | | |||||| || ||||| || | ||||| ||||| Sbjct 1208368 ATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATAGTTTTA 1208309 Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAA 46603 || ||||| || || || ||||| |||||| |||| ||| Sbjct 1208308 CCAGTCAGTGTCTTCACGAAGATCTGCATTCTGCAAAAA 1208270 Score = 113 bits (124), Expect = 5e-20 Identities = 140/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || |||||||||||||||||||| || ||||| | || || |||||||||||||| || Sbjct 1209382 TCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAA 1209323 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || ||||| || | || | | || ||||| ||| || ||| | || Sbjct 1209322 ATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTTGTCTTGGATTTTGGCCTTCACGTTC 1209263 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || ||| || ||| || |||| |||||||| || ||||||| ||||| ||| Sbjct 1209262 TCAATGGTATCGGACGGTTCAACCTCCAAGGTGATGGTCTTTCCCGTCAAGGTTTTGACA 1209203 Query 46583 AAGATTTGCATT 46594 |||||||||||| Sbjct 1209202 AAGATTTGCATT 1209191 Score = 111 bits (122), Expect = 2e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462 || ||||||||||||||||| || || ||||| | || || |||||||||||||| || Sbjct 1209154 TCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAA 1209095 Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522 || | || |||||||| | || | | ||||||||| ||| || ||||| || Sbjct 1209094 ATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTC 1209035 Query 46523 GCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACA 46582 | | || ||| | ||| || |||| |||||||| || ||||||| ||||| || Sbjct 1209034 TCAATGGTATCGGATGGTTCGACTTCCAGAGTGATGGTCTTTCCCGTCAAGGTTTTTACG 1208975 Query 46583 AAGATTTGCAT 46593 ||||| ||||| Sbjct 1208974 AAGATCTGCAT 1208964 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 46367 CCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGAT 46426 || || | || ||||| |||| || | ||| ||||| |||||||| |||||||| Sbjct 1208734 CCACCACGTAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAA 1208675 Query 46427 AGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGC 46486 || ||||| | || || ||||||||||||||||| || | || ||||| || | || Sbjct 1208674 AGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGA 1208615 Query 46487 ACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 46546 | | || ||||| ||| || ||||| || | | ||||| | ||| || Sbjct 1208614 ATCCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGACT 1208555 Query 46547 TCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 |||| ||||||||||| ||||||| ||||| || ||||| ||||| Sbjct 1208554 TCCAAAGTGATGGTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 1208508 Score = 104 bits (114), Expect = 3e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 46384 CACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTC 46443 ||| ||||| | || |||||| || || || |||||||| || || || |||| || Sbjct 1209629 CACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAAAGGGTACGACCGTCTTC 1209570 Query 46444 GAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCAT 46503 |||||||||||||| || ||||| | |||||| || | || | | ||||||||| Sbjct 1209569 CAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATCCCCTCCTTGTCTTG 1209510 Query 46504 GATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTT 46563 ||| ||| || | | | | ||||| | ||| || |||| |||||||| || Sbjct 1209509 GATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTCTT 1209450 Query 46564 GCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 ||| ||||| ||||| || ||||| ||||| Sbjct 1209449 GCCGGTCAGGGTTTTCACGAAGATCTGCAT 1209420 >seq747 Length=644639 Score = 102 bits (112), Expect = 9e-17 Identities = 162/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || || || || |||| || | || |||||||||||||||||||| | Sbjct 462490 TGCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAG 462549 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | ||||| || | || || || || ||||| ||||| ||||| ||||| || || | | Sbjct 462550 AAAGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAG 462609 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCG-TCGCCACCGTGTCGCTCGATTCC 46543 | | || ||| |||||| ||| || ||| | || | | | ||||| | || Sbjct 462610 GAATGCCCTCTTTGTCCTGGAT-TTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCG 462668 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||| ||||| ||||| || ||||| || || |||||||| Sbjct 462669 ACCTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565164396162480