Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq38 109 4e-19 seq365 93.3 3e-14 seq747 87.8 1e-12 >seq38 Length=2283748 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | |||||| ||||| || | ||| ||| || || |||||||| |||| Sbjct 1208734 CCACCACGTAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAA 1208675 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | |||| |||| || | || || ||| | ||||| | ||| |||||||||| || Sbjct 1208674 AGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGA 1208615 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | ||||||||||| ||||| || | || | | ||||| | ||| || Sbjct 1208614 ATCCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGACT 1208555 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCATG 39720 |||||||| || ||||| ||||| || ||||| ||||||||||||||| Sbjct 1208554 TCCAAAGTGATGGTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCATG 1208507 Score = 96.9 bits (106), Expect = 2e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 ||| || || | |||||| ||||| || | ||| ||||||||| ||||| || |||| Sbjct 1209419 GCCACCACGGAGACGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGA 1209360 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 | |||| |||| || | || || ||| ||||||| | ||| |||||||| | ||| Sbjct 1209359 AAGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGG 1209300 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671 | ||||||||||| ||||| || | || | | || || | ||| || Sbjct 1209299 AATCCCTTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAAC 1209240 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||||| || || || || ||||| || ||||| || ||||| ||||| Sbjct 1209239 CTCCAAGGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || || || | ||| || ||||| || | ||| ||||||||| ||||| || || | Sbjct 1209190 CCACCACGGAGACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAA 1209131 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 | |||| |||| || | || || ||| ||||||| | ||| ||||| || | ||| Sbjct 1209130 AGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGA 1209071 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | || || ||||| ||||| || | || | | || || | ||| || Sbjct 1209070 ATCCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACT 1209011 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||| ||| || || || ||||| || |||||||||||||||||||| Sbjct 1209010 TCCAGAGTGATGGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 >seq365 Length=450407 Score = 93.3 bits (102), Expect = 3e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAA 39587 ||| || || || ||||| |||| || ||| |||| || || |||||||| | || Sbjct 426466 TTCCTTCTGAATGTTATAGTCGGATAAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAA 426407 Query 39588 AATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGT 39647 ||||| ||| |||||||| | ||| | ||||||||||| || ||| ||| | | Sbjct 426406 AATTAGACGTTGCTGATCAGGGGGGATACCTTCTTTGTCTTGGATCTTTGCTTTGACATT 426347 Query 39648 CGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTAC 39707 | | | || |||| ||| || || | || || || ||||| || ||||||||||| Sbjct 426346 CTCGATGGTATCTGACGGTTCAACCTCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTAC 426287 Query 39708 GAAGATCTGCATGT 39721 || |||||||||| Sbjct 426286 AAAAATCTGCATGT 426273 >seq747 Length=644639 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 |||||| | ||| || | ||||| || | || ||| ||||| ||||| || || | Sbjct 462491 GCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGA 462550 Query 39552 CAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGG 39611 | | ||| |||| || | |||||| || | || || |||||||| ||||| | || Sbjct 462551 AAGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGG 462610 Query 39612 TACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCAC 39671 | ||| |||||||| ||||| ||||| | ||| |||||| | || || Sbjct 462611 AATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGAC 462670 Query 39672 GTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || | || || ||||||||||| | ||||||||||| || ||||| Sbjct 462671 CTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347325257619242