Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq136 116 4e-21 >seq136 Length=661412 Score = 116 bits (128), Expect = 4e-21 Identities = 295/442 (67%), Gaps = 14/442 (3%) Strand=Plus/Minus Query 154670 AGCAATCCAAGCATACCATCAAGGATCAGGAGATGATAAAAGAAATGTATGTTTGATACC 154729 ||| |||||| ||||| ||| ||| ||| | | ||| | || |||||||| || Sbjct 494285 AGCCATCCAATGCTACCACGAAGCTAGAGGTGATATTCACAGAGACGTGTGTTTGATTCC 494226 Query 154730 AGAGTCAGCACATGGAACTAATCCTGCTAGTGCTGTCATGGCAGGGATGAAAGTTGTAGG 154789 | | || ||||| || || || || || ||| ||||| || ||| ||| | | Sbjct 494225 TGTGAGTGCCCATGGCACCAACCCCGCAAGCGCTCAGATGGCTGGCATGCGAGTAGAACC 494166 Query 154790 TGTCAA-GTGTGATGATGATGGTAACATAGACATCAAAGATCTAGAGAAGAAAGCAATCA 154848 ||| || || || | || || | ||||||| | | || || || |||||| | Sbjct 494165 TGTGAAAGTCCGAC-AGGACGGCACCATAGACGTGGAGGACCTGCAGTCGAAAGCGGAGA 494107 Query 154849 TGAATACATTTGAAC----TGTCATGTATTATGATTACATACCCATCTACACATGGTGTA 154904 | ||| |||| |||| ||| | ||||| || ||||| || || |||| || Sbjct 494106 AGTTTAC----GAACCGGTTGTCTTGTTTCATGATAACTTACCCGTCCACTAATGGAGTC 494051 Query 154905 TTTGAAACTAACATTAGACAGATATGTAAGATCG--TTCATGACAATGGTGGTCAGGTAT 154962 ||||| ||| ||| | || |||| ||| |||| | || || ||||| || | Sbjct 494050 TTTGAGGA-AACCGTAG-CTGACATGTGCGATATAATTCACAAAAACGGCGGTCAAGTGT 493993 Query 154963 ATCTTGATGGAGCAAATCTAAATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTG 155022 | || || || || ||| | || || ||||||||||| | ||| | || || |||| Sbjct 493992 ACCTAGACGGTGCCAATATGAACGCGCAGGTAGGACTGTGCAGACCTGGCGACTACGGTG 493933 Query 155023 CAGATGTATGTCATCTAAACTTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTC 155082 |||||| | || | ||| | || || || ||||| ||||| || || || ||||||| Sbjct 493932 GAGATGTCTCCCACTTGAACCTGCACAAGACTTTCTGCATTCCTCACGGTGGGGGAGGTC 493873 Query 155083 CTGGCGTAGGTCCTATAGGTGT 155104 ||||| | |||||||||||||| Sbjct 493872 CTGGCATGGGTCCTATAGGTGT 493851 Score = 98.7 bits (108), Expect = 1e-15 Identities = 78/94 (83%), Gaps = 0/94 (0%) Strand=Plus/Minus Query 153896 ATACAGATTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAA 153955 |||| | || || | ||||| ||||||||||| |||||||| |||||||| ||||| || Sbjct 501118 ATACCGTTTGGCGTTGCAGACCAGAGAGCAGCACATCAGGAGGGACAAAGCTACCAGCAA 501059 Query 153956 CATCTGCACAGCTCAGGCACTGCTGGCTAATATG 153989 ||||||||| || ||||| ||| |||| |||||| Sbjct 501058 CATCTGCACGGCGCAGGCGCTGTTGGCGAATATG 501025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579136966564160