Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq38 185 2e-41 seq365 152 1e-31 seq747 143 6e-29 >seq38 Length=2283748 Score = 185 bits (204), Expect = 2e-41 Identities = 167/210 (80%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| ||||| |||||||| |||||||| || | ||| || | |||||||| Sbjct 1209173 AACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCCATCTTC 1209114 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || || || ||||| ||||| |||||||| ||||| || || |||||||| Sbjct 1209113 TAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTTGTCTTG 1209054 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||||| |||||||||||||||||| || || ||| ||||| || || | ||||| Sbjct 1209053 GATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAGAGTGATGGTCTT 1208994 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| ||||| ||||||||||| | ||||| Sbjct 1208993 TCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 Score = 185 bits (204), Expect = 2e-41 Identities = 173/220 (79%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||| | || ||| | |||||| ||||| |||||||| |||||||| |||| ||| || | Sbjct 1209410 GAGACGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCG 1209351 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| |||||||| || || || ||||| ||||| || ||||| ||||| ||||| Sbjct 1209350 TCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTC 1209291 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||||||| ||||| ||| |||||||||||||| || || ||| || || | ||| Sbjct 1209290 TTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGT 1209231 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 | |||||||| ||||| ||||| || || | ||||||| Sbjct 1209230 GATGGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCATT 1209191 Score = 165 bits (182), Expect = 2e-35 Identities = 159/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || || ||||| |||||||| || |||| ||||| | |||||||| ||||| Sbjct 1208939 GTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTCTAGCTG 1208880 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || || || ||||||||||| |||||||| ||||| |||||||||||||||||||| Sbjct 1208879 TTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTGAATTTT 1208820 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||| ||||| ||||| || || || ||| || || | ||| | ||||| || || Sbjct 1208819 GGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTCTTGCCCGT 1208760 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| |||||||| || | ||||| Sbjct 1208759 CAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 163 bits (180), Expect = 6e-35 Identities = 164/213 (77%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 || ||| | ||||||||| || || || || ||||| || |||| ||| || | ||||| Sbjct 1208720 CAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTGCGTCCATC 1208661 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| |||||||| || ||||| ||||| ||||| || || |||||||| ||||||||||| Sbjct 1208660 TTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTTGTC 1208601 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| ||||| |||||| ||||| |||||||| || ||| ||||| | || | || Sbjct 1208600 TTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGT 1208541 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || ||||| ||||| ||||| | ||||| Sbjct 1208540 TTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 1208508 >seq365 Length=450407 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981 ||||||||| || || ||||| || || || || ||||| || || |||| | || | Sbjct 426493 GAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGATAAGGTACG 426434 Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041 |||||||| | ||| || || ||||| || || ||||| || || || || || ||||| Sbjct 426433 TCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGGATACCTTC 426374 Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||||||| || ||| ||||| ||||| ||||| || || ||| || |||||||| Sbjct 426373 TTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACCTCAAGGGT 426314 Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| ||||||||||||||||| || | ||||| Sbjct 426313 GATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCAT 426275 >seq747 Length=644639 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 ||||| | |||||| || || || ||||| |||||||| || | |||||| | |||||| Sbjct 462507 AAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAAGAGTACGTCCATCT 462566 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || || || || ||||||||||| | || ||||| || ||||||||||| |||||||| Sbjct 462567 TCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCTTTGTCC 462626 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || ||||| || ||||| || || ||||| ||| || || || || || | || Sbjct 462627 TGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACCTCTAGCGTGATAGTT 462686 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | ||||||||||| | |||||| Sbjct 462687 TTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 194929 AAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCT 194988 ||||| | |||||| || || || ||||| |||||||| || | | |||| | ||||||| Sbjct 465983 AAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGCCCATCT 466042 Query 194989 TCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCT 195048 || || || ||||| |||||||| | || ||||| || |||||||| ||||||||||| Sbjct 466043 TCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCTTTGTCC 466102 Query 195049 TGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTC 195108 || ||||| || ||||| || || | ||| ||| || || || || || | ||| Sbjct 466103 TGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTGATGGTC 466162 Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || || | ||||||||||| | |||||| Sbjct 466163 TTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 Score = 120 bits (132), Expect = 7e-22 Identities = 155/214 (72%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 ||| || | |||||| || ||||| || || || ||||| || | | || | ||||| Sbjct 453147 CAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGACAATGTACGTCCATC 453088 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| || || ||||| |||||||| || ||||| || ||||||||||| || |||||||| Sbjct 453087 TTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGGAATCCCCTCTTTGTC 453028 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107 ||| ||||| || || || || || || || || ||| || || || || | || Sbjct 453027 TTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGACCTCTAGCGTGATAGT 452968 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || || | ||||| ||||| | ||||||| Sbjct 452967 TTTCCCCGTGAGGGTTTTCACGAAAATTTGCATT 452934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109332709649558