Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq38 118 7e-22 seq747 91.5 1e-13 seq365 91.5 1e-13 >seq38 Length=2283748 Score = 118 bits (130), Expect = 7e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || |||||||||||| |||||||| || || | || |||| || Sbjct 1208944 ACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTCT 1208885 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 |||||||| |||||||| || ||||||||||||||| | || | ||| || ||||| | Sbjct 1208884 AGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTGA 1208825 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 || || || ||| | | || | || | || || || | ||| ||||| || Sbjct 1208824 ATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTCTTG 1208765 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 ||||| | || || ||||||||||||||| Sbjct 1208764 CCCGTCAAGGTTTTTACAAAGATCTGCATA 1208735 Score = 114 bits (126), Expect = 8e-21 Identities = 152/211 (72%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| |||||| || || || ||||| |||||| | ||| |||| || Sbjct 1209173 AACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCCATCTTC 1209114 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||||| || |||||||| || || |||||||||||| | || | |||||||||||| Sbjct 1209113 TAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTTGTCTTG 1209054 Query 34892 AATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTT 34951 || || |||||| | || | || | || || || | || ||||| || Sbjct 1209053 GATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAGAGTGATGGTCTT 1208994 Query 34952 TCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 |||||| | || || || |||||||||||| Sbjct 1208993 TCCCGTCAAGGTTTTTACGAAGATCTGCATA 1208963 Score = 105 bits (116), Expect = 4e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 || ||||||||||| ||| |||||| || || || ||||| |||||| | ||| |||| Sbjct 1209404 CAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCATC 1209345 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| || |||||||| || || |||||||| ||| | || | ||| || ||||| Sbjct 1209344 TTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTTGTC 1209285 Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 || || || ||| | || | || | ||||| || | ||| ||||| Sbjct 1209284 TTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGTGATGGT 1209225 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 |||||||| | || || |||||||| ||||| Sbjct 1209224 CTTTCCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||||||||| |||||| | || | || |||||||| || |||||||| Sbjct 1209610 TCCTTCTGAATGTTATAGTCGGAAAGGGTACGACCGTCTTCCAGCTGCTTGCCGGCAAAG 1209551 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || | | ||||| ||| | || | |||||||||||| || ||| ||| || | Sbjct 1209550 ATCAACCTCTGCTGATCTGGGGGAATCCCCTCCTTGTCTTGGATTTTCGCTTTCACATTT 1209491 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | || || || | || ||||| || || || || || ||||| Sbjct 1209490 TCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTCTTGCCGGTCAGGGTTTTCACG 1209431 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 1209430 AAGATCTGCAT 1209420 Score = 95.1 bits (104), Expect = 8e-15 Identities = 151/215 (70%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 || ||||||||||| || ||| ||||| || |||||||| ||||| | ||| |||| Sbjct 1208720 CAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTGCGTCCATC 1208661 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| || ||||| || || || |||||||| || | || | ||| || ||||| Sbjct 1208660 TTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTTGTC 1208601 Query 34889 GCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATG 34946 || || ||||| || || || | ||| | || || || | || ||| Sbjct 1208600 TTGGATTTTGGCCTTGAC--ATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATG 1208543 Query 34947 GTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 ||||| ||||| | || ||||| ||||||||||| Sbjct 1208542 GTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 1208508 Score = 84.2 bits (92), Expect = 1e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||| | ||| ||| ||||| ||||| |||||||| | | | || | || ||| Sbjct 1208488 ACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCCGTCCTCC 1208429 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 | |||||| ||||| || || | | ||||| || | || | ||||| ||||| Sbjct 1208428 AACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTGTCCTGG 1208369 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 ||||| || ||| | || | || | ||| || |||| ||| || ||||| Sbjct 1208368 ATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATAGTTTTA 1208309 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || |||||||| ||||||||||| Sbjct 1208308 CCAGTCAGTGTCTTCACGAAGATCTGCAT 1208280 >seq747 Length=644639 Score = 91.5 bits (100), Expect = 1e-13 Identities = 157/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 || |||||||||| ||||||||||||| || ||| || || || || ||||| ||| Sbjct 462492 CCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAA 462551 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 || | ||| |||| || || ||||| || || || || | || || || || | || Sbjct 462552 AGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGA 462611 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934 | ||||| ||||| || || ||| ||| | |||| | ||| | ||| || Sbjct 462612 ATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACC 462671 Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || | || || ||||| |||||||| || || || || || |||||| Sbjct 462672 TCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCATA 462719 >seq365 Length=450407 Score = 91.5 bits (100), Expect = 1e-13 Identities = 155/223 (70%), Gaps = 10/223 (4%) Strand=Plus/Minus Query 34767 CTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCA 34826 ||||| || | |||| || ||| ||||||||||||||||| || | | | ||| || Sbjct 426489 CTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGATAAGGTACGTCCA 426430 Query 34827 TCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTG 34886 || || | |||||| || || || ||||| |||||||| || | || | || || ||| Sbjct 426429 TCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGGATACCTTCTTTG 426370 Query 34887 TCGCTAATCTTCTGTTTGAC-----GGATGCTATCGATTCACCGGCCTCAACATCGACGG 34941 || ||||| |||||| |||| |||| | || | ||||| || | || Sbjct 426369 TCTTGGATCTTTGCTTTGACATTCTCGATGGTATC---TGAC--GGTTCAACCTCAAGGG 426315 Query 34942 TTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 | ||||| || || || | ||| || ||||| |||||||| || Sbjct 426314 TGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATGTT 426272 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324592159912272