Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1096 385 5e-102 seq349 336 2e-87 >seq1096 Length=295351 Score = 385 bits (426), Expect = 5e-102 Identities = 1231/1899 (65%), Gaps = 47/1899 (2%) Strand=Plus/Minus Query 46965 AATTTGTCTTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAA 47024 || ||| ||| ||||| ||||||| || || || || | |||||||| ||||| Sbjct 68978 AACTTGCTTTTGTCCACGGTAAACTGGATCGGTTTGGCAGCGGGTTTTGTTCTCAAATAG 68919 Query 47025 TACATACCAGTCTTTAAACCTAAACTCCATCCATAGAAATGCAT--ACTAGTTAATTTAG 47082 ||||| || ||||| | || | ||| || ||||| ||||| || || | | Sbjct 68918 TACATGCCTGTCTTAAGCCCCTTGCGCCAGCCGTAGAAGTGCATCGACGAGAGGAC--AC 68861 Query 47083 AATAACTAGGTTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTC 47142 ||| | |||| | | ||||| || | | |||||||||||||| || || || | Sbjct 68860 CATATGTTGGTTTTTCGACGTGAATGTTCAAACTCTGACTCTGATCAATGAAGGCCCCAC 68801 Query 47143 TATCAGCTGCCATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTT 47202 ||| || ||||||| | || || | || | |||||||| || || || ||||| Sbjct 68800 GATCGGCGGCCATATTGAGGATCACTTTCTGCGAAATCTCCCAGACCGTCTTGTAAATAG 68741 Query 47203 GTTTAATGTCTTCTGGGAGATTAGTA---TTTTGAATAGATCCTCCgttttctataattt 47259 ||| | |||||| || | || || || || ||||| || | ||| ||| |||| Sbjct 68740 CTTTGAGGTCTTCAGGAATATCAGGGACGTTCTGGATAGAACCGCAGTTGGCTAAGATTT 68681 Query 47260 tgttttttaattcatttga--ccaaagttttcgttcagttaatgtttttaaAAGATGAGG 47317 ||||| | || ||| | ||| || ||| || || || ||| | | ||| | Sbjct 68680 GATTTTTCA--TCGTTTCATCCCACAGGCCTCGCTCTGTCAAGTCTTTGAGCAAATGGTG 68623 Query 47318 ATTAACAATTTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGG 47377 || || ||||| ||||| || |||| || | |||| | || || || || || || Sbjct 68622 GTTGACTATTTGGAATTCGCCCGATAAGACCCGACGGGTGTAAATGTTTGAGGTGTAAGG 68563 Query 47378 TTCTATAGATTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAAC 47437 ||| || |||||||| ||||||| || |||||||| || ||||| ||||| | ||| | Sbjct 68562 TTCAATGGATTCATTGTTTCCAAGGATCTGAGCAGTGGAAGCTGTCGGCATAGGTGCTAA 68503 Query 47438 TAATAAGCTATTTCTTA-CTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCC 47496 | || || | ||| || | || | ||| ||||| | |||||||| Sbjct 68502 AAGTA-GCGAGTTCCTAACGCCGTGTTTCGCTATCTTTTCTTTCAGTGCTGCCCAATCCC 68444 Query 47497 AAAGATCTGAT-GGAACAACATTCCAAAAATCATATTGAAGAATTCCTTTACTTATCGGA 47555 |||| ||| | || ||| | ||| | ||||| || | || ||||| || | ||| Sbjct 68443 AAAGG-CTGGTAGGCGTAACGTCCCACATGTCATACTGTAAGATCCCTTTGCTAACGGGA 68385 Query 47556 GAACCATTATATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAAT 47615 |||||| || | ||||| || | | ||| || | ||||||||||||||| | Sbjct 68384 CTACCATTGTAAGACGAATAAGTGCCCTTTTGTTCTGCTATTTCACAACTTGCTTCGAGC 68325 Query 47616 GCACTATAATATATTGTTTCAAATATTTTTATGTTTAGATTCCTTGCTTCT--GATGATT 47673 ||| ||| || || || || ||||| | | | || || ||||||||| | || | Sbjct 68324 GCAGCATAGTAAATCGTCTCGAATATCTGTTTATTGAGCAAACTTGCTTCTTCGCTG--T 68267 Query 47674 CAAAAGGATANNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTG 47733 ||||||| |||| |||||| || ||||| || || || || || | Sbjct 68266 CAAAAGGCATCCGTAGGAGTATGAATGCATCTGCTAAACCTTGTACCCCGATTCCTATGG 68207 Query 47734 GTCTATGAGTTTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAA 47793 |||| || |||| ||| || ||||| | ||||| | ||| | ||||| | Sbjct 68206 GTCTGTGGCGACTATTTGAATTTTCCGCTTCCTTAACAGGATAGTAGTTCACGTCTATTA 68147 Query 47794 TTTTATTTAGANNNNNNNNNNNNNNNNNNACAATTTCTCTTAATTTATTAAAATCA-AAC 47852 |||||| || || ||| | || ||| ||| || || Sbjct 68146 TTTTATCGAGGTTTCTCGTTACTAATTTGGTGATGTCTTTCAACATATCAAAGTCGTAAG 68087 Query 47853 TTGTTATTTA-----TAACAAACCTATTAAGTGCTATAGATGCTAGATTACATACAGCTA 47907 || | | | | || ||| |||| | ||||| || |||| ||| ||||| || | Sbjct 68086 TTTTCCTGTCGGCCTTGACGAACATATTGACGGCTATCGAAGCTAAATTGCATACTGCGA 68027 Query 47908 CCTCATTTGGATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTAC 47967 || | || |||||||| || ||||| | |||| ||||| || |||||| |||| Sbjct 68026 TTTCGTCCGGTGAAGTATATTCGATGATTTCCGTGCATAAATTACTACTTTTGATGGTAC 67967 Query 47968 CCAAATTTTGATGATTATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTC 48027 | | ||| || || || | | ||||| || || ||||| | |||| |||| || | Sbjct 67966 CAAGATTCTGTTGGTTGCTCTTTCTATTACAGGCATCTTTGTACAACATATAAGGAGTGC 67907 Query 48028 CAGTTTCTATCTGAGATTCAATGATAGATTTCCAAACAGTCCTAGCCTTTA--TAACAGC 48085 ||||||| | || ||| |||| |||| |||||||| |||||| | || | | Sbjct 67906 CAGTTTCAACTTGGGATACAATAATAGCTTTCCAAAGTTCCCTAGCTTGTACTTGTTTGA 67847 Query 48086 TCTAGCTTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACAC 48145 | || || |||| || || || || | ||||||||||| || || | || Sbjct 67846 TGTAA--TTCCCCTCATTCTCATACTTCTCGTAGAGTTTCTCAAATTCTTCTCCCCA-AC 67790 Query 48146 ATTATCTAAC-CCAGGA--CATTCATTAGGACACATCAATGACCAATCCTCATCATTT-- 48200 | | || || ||| ||| | ||||||||| | |||||| | | ||||| Sbjct 67789 AATCGGAAAGACCCGGAGCCATG--TGAGGACACATAAGAGACCAAAC---ACCATTTGA 67735 Query 48201 -TTTACTCTAGTCATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCT 48259 | ||||| |||| || | |||||| ||||| | || ||||||||| || | || Sbjct 67734 ATCTACTCGTTTCATGAACAAATCTGGGATCCACAATGCATAAAATAAATCTCTTGCTCG 67675 Query 48260 TAGTTCTTCATTGCCACTATTCCT-TTTAAGTTCAAGAAAGTCCATTATATCAGCATGCC 48318 |||||| |||||| | ||| | ||||| || ||| || || | | ||||||||||| Sbjct 67674 GTATTCTTCCTTGCCAGTGTTCTTCTTTAAATT-AAGGAACTCGAAGACATCAGCATGCC 67616 Query 48319 ATGGTTCTAAATATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATC 48378 | |||||||| |||||||| | | |||||||||||||| |||||||| || | ||| | Sbjct 67615 ACGGTTCTAAGTATATTGCAAACGCTCCTGGTCGTTTATTGCCTCCTTGGTCGACATACC 67556 Query 48379 TGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTC 48438 | || || | ||| |||| | | ||| || || | ||| || || | ||| || || | Sbjct 67555 TTGCCGTGCTATTAAAAACCTTCAGCATAGGTACTAGACCGTTCGACACACCGTTAGTGC 67496 Query 48439 CCGAAATATAACTTCCACTAGCTCTTATATTACTAA--TTGAAATACCTATACCACCTGC 48496 | | |||||| |||| | ||||| ||||| || ||| | ||| ||||| || || Sbjct 67495 CTGCAATATATGTTCCTTTGGCTCTGATATTGTGAACGTTG--ACACCAATACCTCCCGC 67438 Query 48497 CATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATC 48556 ||||| || ||| || | ||| | |||| || || |||||||| || Sbjct 67437 TGACTTAGAAATATAAGCGCATTGCGCCAGGCAGTTGAAAATACCCTCAATACTATCGTC 67378 Query 48557 TATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAA 48616 | ||| ||| ||||||||| ||||| ||| || ||| || | |||||| Sbjct 67377 TGGCATCATTAGAAGAAAACAAGAAGACAATTGAGGTCTGGGAGTACCCGCGGAAAATAA 67318 Query 48617 TGTTGGAGATGCATGAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGA 48676 |||||| ||| || | || || | || |||||||| ||||| ||||| ||| | | Sbjct 67317 AGTTGGACTTGCGTGTGTGAAATATCTTTCCGATAACAAATTATAAGTTTCTATAGCGGC 67258 Query 48677 ATCTATATCCCATTGATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTC 48736 ||||| || ||| || || | || || | ||| | ||| | ||||| | ||| Sbjct 67257 GTCTATGTCTTCCCCATGAATTCCCACAGCGACTCTCATGAGCATGTGCTGAGGGCGTTC 67198 Query 48737 AACAATTTTGTTATTTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATA 48796 |||||| || || ||||| | ||||| || || | ||||| ||||| || || Sbjct 67197 AACAATCTTCCCGTTGATTTTGAGCAGATAGGAACGCTCAAGAGTTTTGAAACCGAAGTA 67138 Query 48797 GTTGTATGAAAAGTCGTTATCATTAATAATTGATGAATT 48835 ||||| || ||||| | |||| || || |||| || Sbjct 67137 ATTGTAGGAGAAGTCCCTGTCATATATGATGCATGAGTT 67099 >seq349 Length=550016 Score = 336 bits (372), Expect = 2e-87 Identities = 639/937 (68%), Gaps = 8/937 (1%) Strand=Plus/Minus Query 18658 ATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCT 18717 || || ||| ||| || || ||| | ||| | || || ||||| |||||||| || || Sbjct 192971 ATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCATCA 192912 Query 18718 AATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCT 18777 || ||| ||| ||||| || ||||| | ||||| || |||| | || Sbjct 192911 GTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACAACCG 192852 Query 18778 AATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAATTC 18837 | ||| || | || || || ||||||| ||||| | ||| | | |||||| Sbjct 192851 AGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAATTC 192792 Query 18838 ATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCC 18897 ||||| || | | || |||| ||||| | |||||||||||||| ||| || || Sbjct 192791 ATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACAGCA 192732 Query 18898 TCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTTTAAACATC 18957 ||| || ||| ||| |||| ||| | | || | || |||| |||| Sbjct 192731 TCTCGAATTATACCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAGAACAGT 192672 Query 18958 AAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTT 19017 | || ||||| || ||||||| || || |||||| |||||||||||||| |||||| Sbjct 192671 AGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAGAATGTT 192612 Query 19018 AAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAG 19077 || |||||||| | |||| |||||||| ||||||||||| || || ||||| || Sbjct 192611 AAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCAGAGAAA 192552 Query 19078 AATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTA 19137 |||||||||||||| ||||| || || | | ||||| || | || | || Sbjct 192551 AATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACTCTTCGAG 192492 Query 19138 TGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAA 19197 | ||||| || | ||||||||||||||||| ||||| |||| ||||| |||| | Sbjct 192491 TTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTCTCAATAGCA 192432 Query 19198 TTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTAC 19257 || || || | | | | ||| ||| ||| | || ||||| | |||||| Sbjct 192431 TTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAACATGCTGTAC 192372 Query 19258 ATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTT 19317 ||||||||||| ||||| || ||||| || || || || ||||| || | ||| |||||| Sbjct 192371 ATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGTGCCTCTGTT 192312 Query 19318 ATCTGTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCT 19377 | ||| ||||| | |||||||| || | ||| ||||| ||||||||||| ||| Sbjct 192311 ACCTGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCATCGGAAGCA 192252 Query 19378 GCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTC-ATCTGAGGTTAATGTATT--C 19434 || ||||| || | || ||| || ||||| |||| | | || || || || | Sbjct 192251 GCGAAAAACGCGAGAACGTGTGATATGAAATGCCTTTCGTTATCAG---AAAGTCTTACC 192195 Query 19435 CAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCT 19494 || | || ||||| ||||||||||| ||||| || |||||||| ||||| || ||| Sbjct 192194 CAGTGATCCATATCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAATGAAGCTTCGGCT 192135 Query 19495 TTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTA 19554 | ||| || || ||| ||||| | || || || || ||||||||||| | | Sbjct 192134 TCTTTGTATTTGGCCCAAATATCGGGGTACTGGATGGGGAATATAACAAAGCGTCCTGGG 192075 Query 19555 TTTTCTTTAAGAATAGGTTCCATTTTTTGA--AAAAT 19589 || |||||||||| ||| || | || | || ||||| Sbjct 192074 TTCTCTTTAAGAAGAGGCTCTAGTTCTGGATCAAAAT 192038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562035205905360