Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq747 158 1e-33 seq38 129 5e-25 seq365 118 8e-22 seq233 93.3 3e-14 >seq747 Length=644639 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || || |||||||| || |||||||| ||||| ||||| |||||||| || | Sbjct 462492 CCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAA 462551 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | |||| || | ||| || ||||| || ||||||||||||||||| || ||| Sbjct 462552 AGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGA 462611 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| ||||| || || ||||| ||| || |||||| |||||||| | || || Sbjct 462612 ATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACC 462671 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| ||||| || || | |||||||| || || ||||| Sbjct 462672 TCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 Score = 152 bits (168), Expect = 4e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || || |||||||| || |||||||| ||||| ||||| |||||||| || | Sbjct 465968 CCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAA 466027 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 ||| | |||| || | ||| ||||| || || |||||||||||||||||||| ||| Sbjct 466028 GGAGTGCGCCCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGA 466087 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| || || ||||| ||| || |||||| | |||||| | || || Sbjct 466088 ATACCTTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACC 466147 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || |||| || || || |||| |||||||| || || ||||| Sbjct 466148 TCTAGCGTGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||| ||||| || || || ||||||||||| || || || || ||||| || | Sbjct 453161 CCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 453102 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| || | ||| ||||| || || |||| ||| || ||||| || ||| Sbjct 453101 AATGTACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGGA 453042 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || ||||| ||||| ||||| ||| ||| |||| | ||| ||||| | ||| || Sbjct 453041 ATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGACC 452982 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || || |||| ||||| || || | ||||| || || || ||||| || Sbjct 452981 TCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCATTGT 452932 >seq38 Length=2283748 Score = 129 bits (142), Expect = 5e-25 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || || |||||||| |||||||| || ||||| || |||| || ||| | |||| || Sbjct 1208944 ACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACCATCTTCT 1208885 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 | || || || ||||| || | || || || || || ||||| |||||||| |||||| Sbjct 1208884 AGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTTGTCTTGA 1208825 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 ||||| || || |||| | ||| || |||| ||| || || | |||| || ||| Sbjct 1208824 ATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGATGGTCTTG 1208765 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || ||||||||||| |||||||| Sbjct 1208764 CCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 120 bits (132), Expect = 2e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101241 TTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGG 101300 |||| || | | ||||| ||| || |||||||| ||||||||||| |||||||| || | Sbjct 1209192 TTCCACCACGGAGACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAG 1209133 Query 101301 CGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCG 101360 | || | |||| || | ||||| || ||||| || | ||| || || || || | Sbjct 1209132 AAAGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGG 1209073 Query 101361 GAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCA 101420 |||| || || || ||||| ||||| || || | || | || || || | ||| | Sbjct 1209072 GAATCCCCTCCTTGTCTTGGATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGA 1209013 Query 101421 CTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||| ||||||| || || || || || |||||||| || |||||||| Sbjct 1209012 CTTCCAGAGTGATGGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 Score = 120 bits (132), Expect = 2e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || |||||||| ||||||||||| |||||||| |||| | || | | Sbjct 1209407 ACGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCC 1209348 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||||| || ||||| || | ||| || ||||| || ||||| |||||||| Sbjct 1209347 ATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTT 1209288 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||| ||||| || || | || | || || |||| ||| || || | |||| Sbjct 1209287 GTCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGTGAT 1209228 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || || || ||||| ||||| || ||||| Sbjct 1209227 GGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCAT 1209192 >seq365 Length=450407 Score = 118 bits (130), Expect = 8e-22 Identities = 154/213 (72%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101258 AAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCG 101317 || || | |||||| || ||||| || || || || || |||| | || | |||| Sbjct 426486 AACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGATAAGGTACGTCCATCT 426427 Query 101318 TCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCT 101377 || || || || || || || || | ||| || ||||| || || || |||||||| ||| Sbjct 426426 TCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGGATACCTTCTTTGTCT 426367 Query 101378 TGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTT 101437 || || ||| ||| ||| | || | || || |||| ||| || ||||| |||| || Sbjct 426366 TGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACCTCAAGGGTGATGGTC 426307 Query 101438 TTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || || || |||||||||||||| ||||||||| Sbjct 426306 TTACCTGTCAAAGTTTTTACAAAAATCTGCATG 426274 >seq233 Length=1369072 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 |||||||||||| | || || |||||||| ||||| || || || || | ||| || | Sbjct 301356 CCTCCTCTTAAAAGCAATACCAAATGAAGAGTAGAGTCATTCTGGATGTAGTAGTCAGAC 301415 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | || | |||| | | ||| ||||| ||||| |||| | || ||||| || ||| Sbjct 301416 AATGTGCGTTCATCTTTAAGTTGTTTACCAGCAAAAATCAGGTGTTGCTGATCTGGAGGA 301475 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || | || || | || ||||| ||| ||| |||| | ||| ||||| | ||| ||| Sbjct 301476 AT-CTCCCTATAGC-TGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGATTCGACT 301533 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGT 101472 || | |||| || || || || | |||||||| | || ||||| || Sbjct 301534 TCTACCGTGATAGTCTTTCCCGTGAGGGTTTTTACGATAATTTGCATTGT 301583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396227814319218