Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq747 100 2e-16 seq38 100 2e-16 seq365 93.3 3e-14 seq245 82.4 6e-11 >seq747 Length=644639 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||||||||| | ||| || ||||| || || || || ||||| |||||||| ||||| Sbjct 462491 GCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGA 462550 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 ||| | || | || || | || || || || || |||| ||||||||||| | || Sbjct 462551 AAGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGG 462610 Query 48659 AACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCAC 48718 || |||||| ||||| || || ||| || | | | || || | ||| || Sbjct 462611 AATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGAC 462670 Query 48719 CTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 ||| | ||| || ||||| ||||| | |||||||| ||||| ||||| Sbjct 462671 CTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||||||||| | ||| || ||||| || || || || ||||| |||||||| |||| Sbjct 465966 CGCCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAG 466025 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 | || | || | || || | || ||||| || || |||| ||||||||||| | | Sbjct 466026 AAGGAGTGCGCCCATCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAG 466085 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 ||| || || ||||| || || ||| || | | | || || | ||| | Sbjct 466086 GAATACCTTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGA 466145 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| | ||| || || || ||||| | |||||||| ||||| ||||| Sbjct 466146 CCTCTAGCGTGATGGTCTTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 >seq38 Length=2283748 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | |||||| || || || ||||| |||||||| || || || ||| | ||| Sbjct 1208953 AGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGA 1208894 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 | || || | ||| || |||||||| || ||||| || || || | ||||| || || Sbjct 1208893 CCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCT 1208834 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| ||| || || || | | || || |||| || ||||||| || Sbjct 1208833 TTGTCTTGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTG 1208774 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || |||||||| ||||||||||| |||||||| Sbjct 1208773 ATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 87.8 bits (96), Expect = 1e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 48549 AGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGA 48608 || || | ||| | ||| ||||| ||| || ||||| || || || || || | ||| Sbjct 1209637 AGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAAAGGGTACGA 1209578 Query 48609 TCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCC 48668 |||| |||| |||||| |||||||| |||| | ||| ||||| | ||||| |||||| Sbjct 1209577 CCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATCCCCTCC 1209518 Query 48669 TTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTA 48728 ||||| || || ||| ||| | | | || || | || || |||| || Sbjct 1209517 TTGTCTTGGATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGACTTCCAAAGTG 1209458 Query 48729 ATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || || |||| ||||| || || |||||||| Sbjct 1209457 ATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 1209420 >seq365 Length=450407 Score = 93.3 bits (102), Expect = 3e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 48538 CGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAG 48597 |||| || | || | |||||| | ||| ||||| || || ||||| || || || | Sbjct 426503 CGCCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGG 426444 Query 48598 ATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGG 48657 ||| | || | || || ||||| || || || || || || || || ||||| | || Sbjct 426443 ATAAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGG 426384 Query 48658 GAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCA 48717 | | || || ||||| |||||| ||| ||| | | | ||||||| || | Sbjct 426383 GGATACCTTCTTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAA 426324 Query 48718 CCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 |||| | || || || || || |||||||||||||||||||||||||| Sbjct 426323 CCTCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCAT 426275 >seq245 Length=591816 Score = 82.4 bits (90), Expect = 6e-11 Identities = 106/145 (73%), Gaps = 6/145 (4%) Strand=Plus/Plus Query 7862 TAAAGCAGAAACCAAAGCAGCTTGCCGAAGCTGGATTATACTACACGGGCCGCGGTGATA 7921 ||||||| || || |||| || || || || || ||||| || ||| || ||| Sbjct 29638 TAAAGCAAAAGCCCGCCGAGCTAGCAGAGGCAGGTTTCTACTATACCGGCGTGGGGGATC 29697 Query 7922 TGACAAAGTGTTTCTACTGTGACGGGGGTCTCAAAGATTGG---GAGGAAAACGATATAC 7978 ||| ||| |||||||||| ||||||||||||||||||| ||||| ||||| | Sbjct 29698 AGACGTTGTGCTTCTACTGTGGCGGGGGTCTCAAAGATTGGGAAGAGGATGACGAT---C 29754 Query 7979 CGTGGGAGCAACACGCGCGCTGGTT 8003 | ||||| || ||||||| ||||| Sbjct 29755 CCTGGGAACAGCACGCGCTGTGGTT 29779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380888972601102