Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1096 140 2e-28 >seq1096 Length=295351 Score = 140 bits (154), Expect = 2e-28 Identities = 276/406 (68%), Gaps = 2/406 (0%) Strand=Plus/Minus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 |||| || ||||| || ||| | ||| || |||||||| ||||||| ||||||||| Sbjct 67749 CCAAACACCATTTGAATCTACTCGTTTCATGAACAAATCTGGGATCCACAATGCATAAAA 67690 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCC-GTGATTCTTTTTTAGATCTAAGAAATCAA 26024 ||||||||| |||| |||||| || || ||| ||||| |||| || | ||| || | Sbjct 67689 TAAATCTCTTGCTCGGTATTCTTCCTTGCCAGTG-TTCTTCTTTAAATTAAGGAACTCGA 67631 Query 26025 AAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCAC 26084 | | ||| | ||||| |||||||| || || ||||| ||| || ||| || | Sbjct 67630 AGACATCAGCATGCCACGGTTCTAAGTATATTGCAAACGCTCCTGGTCGTTTATTGCCTC 67571 Query 26085 CTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTG 26144 |||| || || || ||||| || ||| ||||| |||| ||| || |||| || | | Sbjct 67570 CTTGGTCGACATACCTTGCCGTGCTATTAAAAACCTTCAGCATAGGTACTAGACCGTTCG 67511 Query 26145 AAAATCCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGAGCATGAATAC 26204 | | ||||| |||| ||| | | |||| | | ||| |||| |||| | | | || Sbjct 67510 ACACACCGTTAGTGCCTGCAATATATGTTCCTTTGGCTCTGATATTGTGAACGTTGACAC 67451 Query 26205 CGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCGAAAATTCCTT 26264 | || || || || | || |||||| || || | | | | |||||| || | Sbjct 67450 CAATACCTCCCGCTGACTTAGAAATATAAGCGCATTGCGCCAGGCAGTTGAAAATACCCT 67391 Query 26265 TTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTG 26310 || ||||| || ||| || | |||||||||||| ||||| Sbjct 67390 CAATACTATCGTCTGGCATCATTAGAAGAAAACAAGAAGACAATTG 67345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253007698969550