Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1096 159 4e-34 >seq1096 Length=295351 Score = 159 bits (176), Expect = 4e-34 Identities = 852/1346 (63%), Gaps = 30/1346 (2%) Strand=Plus/Plus Query 75608 TACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGT 75667 ||||| ||||| |||||||| ||| || | ||||||||| | ||| ||| || Sbjct 67603 TACTTAGAACCGTGGCATGCTGATGTCTTCGAGTTCCTTAATTTAAAGAAGAACACTGGC 67662 Query 75668 GACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATG 75727 | ||||| || |||||| | |||| | ||||||| ||||| | |||||| Sbjct 67663 AAGGAAGAATACCGAGCAAGAGATTTATTTTATGCATTGTGGATCCCAGATTTGTTCATG 67722 Query 75728 AAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTC 75787 || || || || |||| ||||||||| | ||||| ||| ||| || ||||| Sbjct 67723 AAACGAGTAGATTCAAATGGTGTTTGGTCTCTTATGTGTCCTCACATGGCTCCGGGTCTT 67782 Query 75788 TCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGG---- 75843 ||||| ||| || || ||||| |||||| |||||||| | ||||| Sbjct 67783 TCCGATTGTTGGGGAGAAGAATTTGAGAAACTCTACGAGAAGTATGAGAATGAGGGGAAT 67842 Query 75844 TAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGAC 75903 || | | || | | |||| ||| || ||||||| |||||| | ||| || Sbjct 67843 TACATCAAA--CAA--GTACAAGCTAGGGAACTTTGGAAAGCTATTATTGTATCCCAAGT 67898 Query 75904 GGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAA 75963 || ||||| || || |||||| | ||||| ||||| ||||| | ||||| |||||| | Sbjct 67899 TGAAACTGGCACTCCTTATATGTTGTACAAAGATGCCTGTAATAGAAAGAGCAACCAACA 67958 Query 75964 GAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAA 76023 |||| | || || ||||| || ||| | ||||||||||| | || || || Sbjct 67959 GAATCTTGGTACCATCAAAAGTAGTAATTTATGCACGGAAATCATCGAATATACTTCACC 68018 Query 76024 GGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGA 76083 ||| || | || || |||||||| || || || ||| | | || ||||| | || Sbjct 68019 GGACGAAATCGCAGTATGCAATTTAGCTTCGATAGCCGTCAATATGTTCGTCAAGGCCGA 68078 Query 76084 GACTCGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCT 76143 | |||| || | ||| | | | || ||||| || | || || | ||| || Sbjct 68079 CAGGAAAACTTACGACTTTGATATGTTGAAAGACATCACCAAATTAGTAACGAGAAACCT 68138 Query 76144 AAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCG 76203 | | | || ||| || | ||||| ||| || ||| ||| || |||| || Sbjct 68139 CGATAAAATAATAGACGTGAACTACTATCCTGTTAAGGAAGCGGAAAATTCAAATAGTCG 68198 Query 76204 ACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCT 76262 |||||||| || || | || || |||||| | || |||| ||| || | | | | | Sbjct 68199 CCACAGACCCATAGGAATCGGGGTACAAGGTTTAGCAGATGCATTCATACTCCTACGGAT 68258 Query 76263 ACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATC 76322 | | ||||| || ||||| | | | ||| | || || || || || || Sbjct 68259 GC-CTTTTGACAGCGAAGAAGCAAGTTTGCTCAATAAACAGATATTCGAGACGATTTACT 68317 Query 76323 ACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTG 76382 | || | || || || ||||||||| | || ||| | || | ||| | | | Sbjct 68318 ATGCTGCGCTCGAAGCAAGTTGTGAAATAGCAGAACAAAAGGGCACTTATTCGTCTTACA 68377 Query 76383 AGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGC 76442 | ||| ||||| | ||||| | | |||| ||| ||||||| | || | || | | Sbjct 68378 ATGGTAGTCCCGTTAGCAAAGGGATCTTACAGTATGACATGTGGG-ACGTTACGCCTACC 68436 Query 76443 -TCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGT 76501 | | || |||| | || || ||| || | | | || || | ||| Sbjct 68437 AGCCTTTGGGATTGGGCAGCACTGAAAGAAAAGATAGCGAAACACGGCGTTAGGAACTCG 68496 Query 76502 CTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGC 76561 || | | ||||| ||||| ||||| ||||| || || ||| | || || ||||||| | Sbjct 68497 CTACTTTTAGCACCTATGCCGACAGCTTCCACTGCTCAGATCCTTGGAAACAATGAATCC 68556 Query 76562 TTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATT 76621 ||||||| ||||| ||||||| ||| | | | | | || || || || Sbjct 68557 ATTGAACCTTACACCTCAAACATTTACACCCGTCGGGTCTTATCGGGCGAATTCCAAATA 68616 Query 76622 GTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGG--TCCAAGGATATGA 76679 |||||| | || | |||| ||| | | || || || ||| | || | |||| Sbjct 68617 GTCAACCACCATTTGCTCAAAGACTTGACAGAGCGAGGCCTGTGGGATGAAACG--ATGA 68674 Query 76680 AGGATCTCATGGT-GAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGAT 76738 | ||| || | | | | | ||||| || || || || | ||||| || || || Sbjct 68675 AAAATCAAATCTTAGCCAAC-TGCGGTTCTATCCAGAACGTCCCTGATATTCCTGAAGAC 68733 Query 76739 ATCAAGAATCTCTACCGCACAGTGTGGGAAATCAAGATGAAAGATGTCATTGACATGGCC 76798 |||| | | ||| || || ||||| || | ||||| || | | |||||| Sbjct 68734 CTCAAAGCTATTTACAAGACGGTCTGGGAGATTTCGCAGAAAGTGATCCTCAATATGGCC 68793 Query 76799 GCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTATTCA--TGGAAAGTC 76856 || |||||||| |||||||||||| ||||| ||| |||| ||||| | |||| | Sbjct 68794 GCCGATCGTGGGGCCTTCATTGATCAGAGTCAGAGTTTGAA--CATTCACGTCGAAAAAC 68851 Query 76857 CAAC----GATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAA 76912 |||| | |||| ||||| || ||||| | |||| ||| ||||||| || Sbjct 68852 CAACATATGGTGTC----CTCTCGTCGATGCACTTCTACGGCTGGCGCAAGGGGCTTAAG 68907 Query 76913 ACCGGAATGTACTATCTCCGATCAAA 76938 || || ||||||||| | || |||| Sbjct 68908 ACAGGCATGTACTATTTGAGAACAAA 68933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596491494125120