Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq747 123 4e-23 seq365 120 5e-22 seq38 118 2e-21 >seq747 Length=644639 Score = 123 bits (136), Expect = 4e-23 Identities = 166/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||||||||| || | ||||| || | |||| ||| || || || ||||| Sbjct 453164 ATACCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCA 453105 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || || | ||| || | |||||| || || || || | | || ||||| ||| Sbjct 453104 GACAATGTACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGA 453045 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || || ||||| ||||| ||||| | ||| | |||| |||||||| || | || Sbjct 453044 GGAATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCG 452985 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || ||||| || |||||||| || || || ||||| || || ||||||||| Sbjct 452984 ACCTCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCATT 452934 Score = 116 bits (128), Expect = 7e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| ||||| || | || | ||| || | |||||| || || || || || | | Sbjct 462537 ATATTGTAGTCAGAAAGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGC 462596 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 |||||||||||||| || || ||||| || || ||||| | ||| | ||| || || Sbjct 462597 TGTTGATCAGGAGGAATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTG 462656 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || |||| ||| || ||||| || ||||||||||| || || |||||||| || |||||| Sbjct 462657 TCAGAAGGCTCGACCTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGC 462716 Query 193359 AT 193360 || Sbjct 462717 AT 462718 >seq365 Length=450407 Score = 120 bits (132), Expect = 5e-22 Identities = 138/186 (74%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 193178 AATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCT 193237 ||| |||||||||||||| || | ||| ||||| ||||| || || ||||||| | Sbjct 426457 AATGTTATAGTCGGATAAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACG 426398 Query 193238 CTGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGT 193297 || |||||||| || || |||||||| ||||| || || | ||| | ||| || || Sbjct 426397 TTGCTGATCAGGGGGGATACCTTCTTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGT 426338 Query 193298 ATCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTG 193357 ||| || | ||||| || || || || || |||||||| | ||||||||||| || || Sbjct 426337 ATCTGACGGTTCAACCTCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTG 426278 Query 193358 CATTTT 193363 ||| || Sbjct 426277 CATGTT 426272 >seq38 Length=2283748 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || || |||| || | || | ||||| ||||||||||||| Sbjct 1208965 ATACCACCACGAAGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCG 1208906 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | | ||| |||| ||||| ||||||||||| | || || || || || Sbjct 1208905 GAGAGAGTGCGACCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGG 1208846 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| ||||||| || | ||| |||||||||||| | || Sbjct 1208845 GGAATCCCTTCTTTGTCTTGAATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCG 1208786 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || | || || || || || || | ||||||||||| || ||||| Sbjct 1208785 ACCTCCAAGGTGATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 96.9 bits (106), Expect = 6e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 ||||| |||||||| | || | ||| |||| || || ||||||||||| | | Sbjct 1209373 ATATTGTAGTCGGAAAGGGTGCGTCCATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGT 1209314 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || ||||| || || || |||||||| ||||| ||||||| || | || ||| ||| Sbjct 1209313 TGCTGATCTGGGGGAATCCCTTCTTTGTCTTGGATTTTGGCCTTCACGTTCTCAATGGTA 1209254 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 ||||| | ||||| || | || || || || || || | ||||| ||||| |||||| Sbjct 1209253 TCGGACGGTTCAACCTCCAAGGTGATGGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGC 1209194 Query 193359 ATT 193361 ||| Sbjct 1209193 ATT 1209191 Score = 96.9 bits (106), Expect = 6e-15 Identities = 151/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193145 TCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGA 193204 |||||| || ||||| | || | ||| || ||| ||||||||||| | || | | Sbjct 1209635 TCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAAAGGGTACGACC 1209576 Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 || || | || || |||||||| || || ||||| ||||| || || || || || || Sbjct 1209575 GTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATCCCCTCCTT 1209516 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| ||||| | ||| | |||| || || || || | || ||||| | ||| || Sbjct 1209515 GTCTTGGATTTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGAT 1209456 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || ||||| || || || ||||| Sbjct 1209455 GGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 1209420 Score = 93.3 bits (102), Expect = 8e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 || ||||||| ||||| || | || || || || ||||| || || || | Sbjct 1208494 CGGAGTACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCCG 1208435 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || || ||||| ||||| || || || ||||| ||||| ||||| || || ||||| Sbjct 1208434 TCCTCCAACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTG 1208375 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| || | || || || ||||| | ||| || || || || ||| Sbjct 1208374 TCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATA 1208315 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 |||||||| || || || || || || || |||||| Sbjct 1208314 GTTTTACCAGTCAGTGTCTTCACGAAGATCTGCATT 1208279 Score = 91.5 bits (100), Expect = 3e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | || || |||| || | |||| || || |||||||||||| Sbjct 1208737 ATACCACCACGTAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCG 1208678 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || | || | ||| |||| || || ||||| ||||| | | || ||||| ||| Sbjct 1208677 GAAAGTGTGCGTCCATCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGA 1208618 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| ||||||| || | ||| || || || || | || Sbjct 1208617 GGAATCCCTTCTTTGTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCG 1208558 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||||| | ||| || ||||| || || | ||||| || || || ||||| Sbjct 1208557 ACTTCCAAAGTGATGGTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 1208508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899536612747680