Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq190 196 4e-45 seq38 86.0 5e-12 seq365 82.4 6e-11 >seq190 Length=1749563 Score = 196 bits (216), Expect = 4e-45 Identities = 216/285 (76%), Gaps = 2/285 (1%) Strand=Plus/Minus Query 34355 ACTTGCGGATGAAACCATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGA 34414 ||||||| ||||| ||||| || || ||||| | ||| || ||| ||||| || || | Sbjct 78811 ACTTGCGAATGAAGCCATCCAGAAGATCCTGCAGCTTGGAGGCGTCATGGGAACCATTAA 78752 Query 34415 CGATGAATCGTTCGTTTTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGT 34474 | ||||| ||||| |||||| | || | ||| ||||| ||||||| |||||| || |||| Sbjct 78751 CAATGAAACGTTCATTTTTGAAGTCAAACTGGGTTTGAGCGCCCAACTCGCAGCCAAAGT 78692 Query 34475 ACTTTGTCGGGTAAATGGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGA 34534 |||| || |||||| ||| || | || || ||||| || | || | ||| || |||| Sbjct 78691 ACTTGGTGGGGTAAGTGGGTGGTCTGCCGAGGGCCTTAGCCACCTCAGCCATATTAACGA 78632 Query 34535 TGACAGTCTTGATGCCGTTGCCCTTTCCTTCGACCTTGGCGCAGATG-CGCGGCATTTTG 34593 ||||||| |||||||| || ||||| ||||| || ||||| || | | || ||||||||| Sbjct 78631 TGACAGTTTTGATGCCATTACCCTTACCTTCTACTTTGGC-CATAAGACGTGGCATTTTG 78573 Query 34594 TAGCGGTAGAACGCGTCCGCCACATTGCGGTTAACGTTCACAGTC 34638 ||||| ||||| | || ||||| | ||| ||||| ||| || Sbjct 78572 TAGCGATAGAAAACATCGCTGACATTTCTGTTTACGTTGACACTC 78528 Score = 84.2 bits (92), Expect = 2e-11 Identities = 112/153 (73%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 34204 GGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGATAA 34263 || ||||| || || ||||| || || ||||| | | | ||| ||||| ||| Sbjct 79346 GGAGGGTTCTTGAGAATGAACGTTACTAGTTTATGGTTGGATTCAAGCAGTCCGTGGTAA 79287 Query 34264 CCGCATGCTTTGCAGCCCTGACAGATAATG-TTCTTTTTAGCGGACACGATGAGCTCAGT 34322 ||||| ||||||||||||||| |||| || |||||||| |||||| || || || || Sbjct 79286 CCGCAGGCTTTGCAGCCCTGAGAGATGGTGCCCCTTTTTAG-GGACACTATTAGATCGGT 79228 Query 34323 CTCCGGGTTGTCACATTCCGGACACAACACAAA 34355 || || ||||| ||||| || |||| ||||| Sbjct 79227 TTCAGGATTGTCGCATTCAGGGCACAGGACAAA 79195 >seq38 Length=2283748 Score = 86.0 bits (94), Expect = 5e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| ||||| || || ||||| ||||| ||| | || || || | Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || || || ||| ||||||||||| | ||| || || Sbjct 1208796 GATACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAG 1208855 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| ||||||||| ||| || |||||||| || |||| | || | | || || || Sbjct 1208856 CAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAAT 1208915 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTG 110482 ||||| |||||||| || | ||| ||||| Sbjct 1208916 ATTCAGAAAGAATCGACCCTTCACTTGGTG 1208945 Score = 82.4 bits (90), Expect = 6e-11 Identities = 144/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 ||||||||| ||||||||||| || || || || ||||| ||| | || || || Sbjct 1209191 AATGCAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTC 1209250 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 |||||| | | | || || || || ||||||||||| | ||| ||||| Sbjct 1209251 CGATACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCA 1209310 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||| | ||||||| ||| || || ||||| || |||| | || | | || ||||| Sbjct 1209311 GCAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAA 1209370 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGT 110481 || ||||||||||| || | ||| |||| Sbjct 1209371 TATCCAAAAAGAATCCACCCTTCACTTGGT 1209400 >seq365 Length=450407 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329 || ||||| || ||||| |||||||| || || || ||||| ||| | || || || Sbjct 426272 AACATGCAGATTTTTGTAAAAACTTTGACAGGTAAGACCATCACCCTTGAGGTTGAACCG 426331 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||||| ||| | || ||| ||||| ||||||||||| | ||| ||| Sbjct 426332 TCAGATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAAGAAGGTATCCCCCCTGAT 426391 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 || ||| | || |||| || || |||||| | || |||| | || | | || || Sbjct 426392 CAGCAACGTCTAATTTTCGCTGGGAAACAGTTAGAAGATGGACGTACCTTATCCGACTAT 426451 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| || ||||| ||| | || | ||||| ||||| || || || Sbjct 426452 AACATTCAGAAGGAATCAACGCTTCATCTCGTGTTGAGACTCCGTGGTGG 426501 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412788899995682