Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq38 105 1e-17 seq233 102 1e-16 seq747 87.8 3e-12 >seq38 Length=2283748 Score = 105 bits (116), Expect = 1e-17 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || ||||||| || || || || || || || | || || |||| || Sbjct 1208737 TGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCCG 1208796 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||||||| |||| || || ||||| ||| |||||||| ||||| || || || | Sbjct 1208797 ATACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAGC 1208856 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || |||| |||||||| || ||||| |||| ||| | | || | | || ||||||| Sbjct 1208857 AACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAATA 1208916 Query 146212 TACAAAAAGAATCGAC 146227 | || ||||||||||| Sbjct 1208917 TTCAGAAAGAATCGAC 1208932 Score = 87.8 bits (96), Expect = 3e-12 Identities = 137/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| || || ||||| || || || | || || |||| || Sbjct 1209193 TGCAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTCCG 1209252 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | || || || ||||| ||| |||||||| ||||| || ||||| | Sbjct 1209253 ATACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCAGC 1209312 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| || || || |||| ||| | || | | || || |||| Sbjct 1209313 AACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAATA 1209372 Query 146212 TACAAAAAGAATCGAC 146227 | ||||||||||| || Sbjct 1209373 TCCAAAAAGAATCCAC 1209388 Score = 84.2 bits (92), Expect = 3e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| ||||||| || || ||||| || || ||| | || || |||| || Sbjct 1208965 TGCAGATCTTCGTAAAAACCTTGACGGGAAAGACCATCACTCTGGAAGTCGAACCATCCG 1209024 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 |||| ||| | || || || ||||| ||| || || || ||||| || || || | Sbjct 1209025 ATACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAGGAGGGGATTCCCCCAGACCAGC 1209084 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | || |||||||| || || || |||| ||| | || | | || || |||| Sbjct 1209085 AACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCTGACTACAATA 1209144 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACG 146245 | ||||||||||| || | || || || |||| Sbjct 1209145 TCCAAAAAGAATCCACCCTTCACTTGGTTCTACG 1209178 >seq233 Length=1369072 Score = 102 bits (112), Expect = 1e-16 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAA-CATAAC 146090 ||||||| || ||||||| | || ||||| || || || | || || ||| ||| Sbjct 301579 TGCAAATTATCGTAAAAACCCTCACGGGAAAGACTATCACGGTAGAAGTCGAATCATCT- 301521 Query 146091 GATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAA 146150 |||||||| ||||||| ||| |||||| || || | | || ||||| || ||||| Sbjct 301520 GATACTATCGAAAATGTGAAAGCTAAAATCCAGCTATAGGGAG--ATTCCTCCAGATCAG 301463 Query 146151 CAAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAAT 146210 ||| || |||||||| ||||||||| | | ||| | | || || | || || | Sbjct 301462 CAACACCTGATTTTTGCTGGTAAACAACTTAAAGATGAACGCACATTGTCTGACTACTAC 301403 Query 146211 ATACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 || || || || || ||| | ||||| ||||| | ||||||||||||| Sbjct 301402 ATCCAGAATGACTCTACTCTTCATTTGGTATTGCTTTTAAGAGGAGGTA 301354 >seq747 Length=644639 Score = 87.8 bits (96), Expect = 3e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| ||| ||||||| |||| || || || || || | || || || | | | Sbjct 466193 TGCAAATTTTCGTAAAAACCCTAACGGGTAAGACCATCACGCTAGAGGTCGAGCCTTCTG 466134 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | | || |||| || ||| |||||| || |||||||| ||||| |||||||||| Sbjct 466133 ACCCAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAAGGTATTCCTCCCGATCAAC 466074 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | | || || || ||||||||| |||| ||| | || | || || |||| Sbjct 466073 AGCGTTTGATCTTCGCGGGTAAACAACTAGAAGATGGGCGCACTCCTTCTGACTACAATA 466014 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGG 146257 | ||||| ||||| || | || || || ||||| || || || || Sbjct 466013 TCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTTGAGGGGCGG 465968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786063471164080