Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq38 150 1e-31 seq747 149 5e-31 seq365 129 5e-25 seq233 100 2e-16 >seq38 Length=2283748 Score = 150 bits (166), Expect = 1e-31 Identities = 175/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 29551 TATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTA 29610 ||| | || ||||| | | || ||||| | ||| ||||| || || || ||||||||| Sbjct 1209655 TATTGCTGCCCTCCACGGAGTCGAAGCACTAGATGGAGCGTCGACTCCTTCTGAATGTTA 1209596 Query 29611 TAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGA 29670 || || | || ||| ||| || || || || ||||| ||| | ||||| || |||||| Sbjct 1209595 TAGTCGGAAAGGGTACGACCGTCTTCCAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGA 1209536 Query 29671 TCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAA 29730 || || ||||| ||||| |||||||| | ||| ||| ||| |||| | |||||||| Sbjct 1209535 TCTGGGGGAATCCCCTCCTTGTCTTGGATTTTCGCTTTCACATTTTCGATGGTGTCAGAT 1209476 Query 29731 AGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 |||| ||||| | ||| || || ||||| || | |||||| || || |||||||| Sbjct 1209475 GGTTCGACTTCCAAAGTGATGGTCTTGCCGGTCAGGGTTTTCACGAAGATCTGCAT 1209420 Score = 145 bits (160), Expect = 6e-30 Identities = 164/217 (76%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| |||||||| ||||| || |||||||| ||||| ||||| || | | |||||| Sbjct 1208951 ACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGACC 1208892 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || |||||||| ||| | || | || |||||| || || ||||| || ||||| Sbjct 1208891 ATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCTTT 1208832 Query 29691 GTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTA 29749 |||||| |||||| | || || |||| | ||| || || |||| || || | || | Sbjct 1208831 GTCTTG-AATTTTGGCCTTCACGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGTGA 1208773 Query 29750 TAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || ||||| || |||||||| ||||| |||||||| Sbjct 1208772 TGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 Score = 141 bits (156), Expect = 7e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| ||||| ||||| || ||||| || || || ||||| || | || ||||| Sbjct 1208723 ACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTGCGTCC 1208664 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || ||||| || | || | | |||||||||||| ||||| || ||||| Sbjct 1208663 ATCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTT 1208604 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| |||||| | || | |||||||| |||| ||||| | ||| || Sbjct 1208603 GTCTTGGATTTTGGCCTTGACATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGAT 1208544 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||||| || || |||||||| || || |||||||| Sbjct 1208543 GGTTTTCCCCGTCAAGGTTTTCACGAAGATCTGCAT 1208508 Score = 132 bits (146), Expect = 4e-26 Identities = 159/216 (74%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| ||||| |||||||||||||| || || || || | || |||||| Sbjct 1209179 ACGTAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCC 1209120 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || ||||| ||| | || | | |||||| || || ||||| ||||| || Sbjct 1209119 ATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTT 1209060 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| ||||| | || | || || || |||| ||||| ||||| || Sbjct 1209059 GTCTTGGATTTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAGAGTGAT 1209000 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || |||||||| || || |||||||| Sbjct 1208999 GGTCTTTCCCGTCAAGGTTTTTACGAAGATCTGCAT 1208964 Score = 125 bits (138), Expect = 6e-24 Identities = 158/217 (73%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 |||||| ||||| ||||| |||||||||||||| || || || || | || |||||| Sbjct 1209407 ACGCAGAACCAAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCC 1209348 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || || || ||||| ||| | || | | ||||||||| || ||||| || ||||| Sbjct 1209347 ATCTTCTAGCTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTT 1209288 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | ||| || || | || | || || || |||| || || | || || Sbjct 1209287 GTCTTGGATTTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGTGAT 1209228 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || || |||||||| ||||| || |||||| Sbjct 1209227 GGTCTTTCCCGTCAAGGTTTTGACAAAGATTTGCATT 1209191 Score = 98.7 bits (108), Expect = 8e-16 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||| || ||||| || | |||||||| || || ||||| || |||| | ||| || Sbjct 1208495 ACGGAGTACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCC 1208436 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 || || | |||||||| || | ||||| || |||||||| || || || |||||||| Sbjct 1208435 GTCCTCCAACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTT 1208376 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 ||| || | || || || | || | ||||| || | || || || || || || Sbjct 1208375 GTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGAT 1208316 Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||||| ||||| | || || || || ||||||||| Sbjct 1208315 AGTTTTACCAGTCAGTGTCTTCACGAAGATCTGCATT 1208279 >seq747 Length=644639 Score = 149 bits (164), Expect = 5e-31 Identities = 172/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-C 29618 || || |||||||||| ||||| ||||| || || || || || ||||| || || | | Sbjct 453161 CCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 453102 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 |||| | || ||| || |||||||| ||||| | |||| | ||||||||| || || Sbjct 453101 AATG-TACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGG 453043 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| |||||||||||||| | ||| ||| ||| |||| | ||| ||||| |||| || Sbjct 453042 AATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGAC 452983 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || || || |||||||| || || | |||||| || || || |||||| Sbjct 452982 CTCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCATT 452934 Score = 140 bits (154), Expect = 2e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || |||||||| || | ||||| ||||| || ||||| ||||| || || || || | | Sbjct 462492 CCGCCCCTCAACCGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAA 462551 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || || ||| || ||||||||||| || | ||||| | || ||||| || ||| Sbjct 462552 AGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGA 462611 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 || ||||||||||| || | ||| ||| || |||||| ||||||||| | || || Sbjct 462612 ATGCCCTCTTTGTCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACC 462671 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || |||||||| || || | |||||| || || || ||||| Sbjct 462672 TCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 >seq365 Length=450407 Score = 129 bits (142), Expect = 5e-25 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 29574 CAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATC 29633 || ||| | ||||||||| ||||| || ||||||||||| || | | ||| || ||| Sbjct 426487 CAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGATAAGGTACGTCCATC 426428 Query 29634 ATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTC 29693 || | ||||| ||||| | || | | ||||||||| || || ||||| |||||||| Sbjct 426427 TTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGGATACCTTCTTTGTC 426368 Query 29694 TTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGT 29753 ||| | ||| ||||||| | || | || || || |||| || ||||| || || || Sbjct 426367 TTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACCTCAAGGGTGATGGT 426308 Query 29754 TTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || ||||| ||||| |||||||| || Sbjct 426307 CTTACCTGTCAAAGTTTTTACAAAAATCTGCATGTT 426272 >seq233 Length=1369072 Score = 100 bits (110), Expect = 2e-16 Identities = 164/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCG-C 29618 ||||| || ||| ||| ||||||||||| || || || || || |||| || || | | Sbjct 301356 CCTCCTCTTAAAAGCAATACCAAATGAAGAGTAGAGTCATTCTGGATGTAGTAGTCAGAC 301415 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 ||| ||||| ||| | |||||||| |||||| | |||| ||||||||| || || Sbjct 301416 AAT-GTGCGTTCATCTTTAAGTTGTTTACCAGCAAAAATCAGGTGTTGCTGATCTGGAGG 301474 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 ||| | | || | || | ||||| | ||| ||| |||| | ||| ||||| ||| | Sbjct 301475 AAT-CTCCCTATAGCTGG--ATTTTAGCTTTCACATTTTCGATAGTATCAGATGATTCGA 301531 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 |||| | || ||||| || || || | |||||| || | || |||||| Sbjct 301532 CTTCTACCGTGATAGTCTTTCCCGTGAGGGTTTTTACGATAATTTGCATT 301581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385170026046834