Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq17 87.8 3e-12 >seq17 Length=2144227 Score = 87.8 bits (96), Expect = 3e-12 Identities = 158/227 (70%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 52108 ACTTTG-TAACCGTGCACCATTTTTTAGATTTTGTATCGTAGCATCCCAT-AAGAAAACT 52165 |||||| |||| ||||| |||||||| || | || |||||| ||||| |||||||| Sbjct 1931510 ACTTTGGTAACGGTGCAGAATTTTTTATTGTTCGGATTGTAGCAACCCATCAAGAAAAC- 1931452 Query 52166 GGATAGAATACCAGATTTATTACCTTTTCCGTAATAAGCACCCAGAACTACTAGATCAGC 52225 ||| | || || ||| || ||| |||| || |||| || | ||| | || ||| || Sbjct 1931451 GGACATCATTCCTCCTTTCTTGCCTGTTCCATACCAAGCCCCTAAAACGATTAAATCTGC 1931392 Query 52226 TTTATCTGCCATAATACAACCATCTAAGTAGTCtttttttATTTTCAGCCATCTACGCAT 52285 | |||| ||||| | ||| | |||||| ||||| | |||| ||| | | Sbjct 1931391 TGTATCCGCCATCGCCCCACCGAAGAGGTAGTCCTTTTTCACCTTCAACCAGTGCCTTTT 1931332 Query 52286 ACCAGGTTCGTATACACCTTTTGCATCTTTGAGTACAAATCCTTCTA 52332 |||||||||||||| || ||| ||||| | || | ||||||| Sbjct 1931331 ACCAGGTTCGTATATACTTTTCATGTCTTTCAACACCAGACCTTCTA 1931285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903292920888640