Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq38 123 2e-23 seq365 93.3 4e-14 >seq38 Length=2283748 Score = 123 bits (136), Expect = 2e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGC 133514 || || | |||||| || ||||| || ||||| || || || | |||||| | | Sbjct 1208485 AAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGACAAGGTACGCCCGTCCTCCAAC 1208426 Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 || ||||| ||| | || | || |||||| |||||||||||||| || ||||| |||| Sbjct 1208425 TGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTGTCCTGGATC 1208366 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | ||| | ||||||| |||||||| |||| ||||| ||||| || Sbjct 1208365 TTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATAGTTTTACCA 1208306 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 ||||| || || ||||| |||||||| Sbjct 1208305 GTCAGTGTCTTCACGAAGATCTGCAT 1208280 Score = 105 bits (116), Expect = 6e-18 Identities = 149/207 (72%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||| ||||| || |||||||| || | ||| | | | || || || Sbjct 1209169 AAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCAGAAAGGGTGCGTCCA-TCTTCTAG 1209111 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || |||| || || |||||||| || || || || |||||||| ||| Sbjct 1209110 CTGCTTGCCGGCAAAAATAAGACGTTGCTGGTCTGGGGGAATCCCCTCCTTGTCTTGGAT 1209051 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||||| | ||||| || |||| || || || || | |||| ||| || || Sbjct 1209050 TTTGGCCTTGACGTTCTCAATGGTATCGGATGGTTCGACTTCCAGAGTGATGGTCTTTCC 1208991 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||||||||| |||||||| Sbjct 1208990 CGTCAAGGTTTTTACGAAGATCTGCAT 1208964 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| ||||| || ||| | ||| | | | || || ||||||||||| Sbjct 1208704 GTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTGCGTCCA-TCTTCTAGCTGCTTGCC 1208646 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| || || ||||| || ||||| || ||||| ||||| ||| || ||| Sbjct 1208645 GGCGAAAATAAGACGTTGCTGATCCGGAGGAATCCCTTCTTTGTCTTGGATTTTGGCCTT 1208586 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | ||| | ||||| | || || || || | |||| |||||| || |||| || Sbjct 1208585 GACATTCTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTTTTCCCCGTCAAGGT 1208526 Query 133643 TTTTACGAAAATCTGCATG 133661 ||| ||||| ||||||||| Sbjct 1208525 TTTCACGAAGATCTGCATG 1208507 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | |||||| ||||| || |||||||| ||| | ||| | | | || || || Sbjct 1209397 AAGTGAAGGGTGGATTCTTTTTGGATATTGTAGTCGGAAAGGGTGCGTCCA-TCTTCTAG 1209339 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 ||||||||| || |||| || || ||||| || || || || ||||| ||||| ||| Sbjct 1209338 CTGCTTGCCGGCAAAAATAAGACGTTGCTGATCTGGGGGAATCCCTTCTTTGTCTTGGAT 1209279 Query 133574 CTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCC 133633 || ||| | | ||||| || |||| || || || || | ||||| ||| || || Sbjct 1209278 TTTGGCCTTCACGTTCTCAATGGTATCGGACGGTTCAACCTCCAAGGTGATGGTCTTTCC 1209219 Query 133634 GGTCAGAGTTTTTACGAAAATCTGCAT 133660 |||| ||||| || || || ||||| Sbjct 1209218 CGTCAAGGTTTTGACAAAGATTTGCAT 1209192 Score = 89.7 bits (98), Expect = 5e-13 Identities = 143/201 (71%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || || || ||| | || |||| ||| || |||||||||| Sbjct 1209616 GTCGACTCCTTCTGAATGTTATAGTCGGAAAGGGT--ACGACCGTCTTCCAGCTGCTTGC 1209559 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || | || |||||| || || || || || |||||||| ||| ||| ||| Sbjct 1209558 CGGCAAAGATCAACCTCTGCTGATCTGGGGGAATCCCCTCCTTGTCTTGGAT-TTTCGCT 1209500 Query 133582 TGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 | | | || | ||||| | || || || || | |||| ||| ||||||||||| Sbjct 1209499 TTCACATTTTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTCTTGCCGGTCAGG 1209440 Query 133641 GTTTTTACGAAAATCTGCATG 133661 ||||| ||||| ||||||||| Sbjct 1209439 GTTTTCACGAAGATCTGCATG 1209419 >seq365 Length=450407 Score = 93.3 bits (102), Expect = 4e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 || || | ||| || || ||| |||| || || ||||| || || ||||| ||||| ||| Sbjct 426429 TCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGGATACCTTCTTTG 426370 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || ||||||| |||| | ||| | || || | || || || || | ||||| | Sbjct 426369 TCTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACCTCAAGGGTGATG 426310 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCATG 133661 || || || |||| ||||||||| |||||||||||| Sbjct 426309 GTCTTACCTGTCAAAGTTTTTACAAAAATCTGCATG 426274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483357508131760