Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq1096 260 3e-64 >seq1096 Length=295351 Score = 260 bits (288), Expect = 3e-64 Identities = 581/865 (67%), Gaps = 23/865 (3%) Strand=Plus/Plus Query 110304 TATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCATT 110363 || || ||||||||||||||||| ||| | ||| | || |||| || |||| || Sbjct 67138 TACTTCGGTTTCAAAACTCTTGAGCGTTCCTATCTGCTCAAAATCAACGGGAAGATTGTT 67197 Query 110364 GAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTAAA 110423 ||||| ||||| |||||| | | | || || | || |||||||| | || || | Sbjct 67198 GAACGCCCTCAGCACATGCTCATGAGAGTCGCTGTGGGAATTCATGGGGAAGACATAGAC 67257 Query 110424 GCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT-----CATGCTACTC 110478 || | ||| ||| |||| || | ||| ||||| |||| || || | || Sbjct 67258 GCCGCTATAGAAACTTATAATTTGTTATCG-----GAAAGATATTTCACACACGCAAGTC 67312 Query 110479 CTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTCTAGGAA 110538 | || ||||| ||| || ||| || |||||| ||||||| ||||||||| | Sbjct 67313 CAACTTTATTTTCCGCGGGTACTCCCAGACCTCAATTGTCTTCTTGTTTTCTTCTAATGA 67372 Query 110539 TTAACGATGATTCTATTGAAGGTATTTATGA-TGCTCTTAAAGAAACTGCTCTTATTTCT 110597 | || ||| |||||| ||||||| | ||| || || ||| ||||||| Sbjct 67373 TGCCAGACGATAGTATTGAGGGTATTTTCAACTGC-CTGGCGCAATGCGCTTATATTTCT 67431 Query 110598 AAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATATC 110657 || | ||||| |||||| | ||||||| |||| | | |||||| || |||| Sbjct 67432 AAGTCAGCGGGAGGTATTGGTGTCAACGTTCACAATATCAGAGCCAAAGGAACATATATT 67491 Query 110658 GCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACACT 110717 ||| | || |||| || | || || || || ||| | | || || || ||| Sbjct 67492 GCAGGCACTAACGGTGTGTCGAACGGTCTAGTACCTATGCTGAAGGTTTTTAATAGCACG 67551 Query 110718 GCAAAATATGTGAATCAAGGTGGTAAGA---GAAATGGCTCATTTGCTATCTATCTCGAA 110774 |||| ||||| | ||||| || || | || || | ||||| || || | ||| Sbjct 67552 GCAAGGTATGTCGACCAAGGAGGCAATAAACGACCAGGAGCGTTTGCAATATACTTAGAA 67611 Query 110775 CCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAA-GGATTTGAAGA 110833 || |||||| | ||| | || || ||| | || || || | || || ||||| Sbjct 67612 CCGTGGCATGCTGATGTCTTCGAGTTCCTT-AATTTAAAGAAGAACACTGGCAAGGAAGA 67670 Query 110834 ACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTGT 110893 | | ||||| | ||||||||||||||| ||||||| ||||||| ||||||||||| || Sbjct 67671 ATACCGAGCAAGAGATTTATTTTATGCATTGTGGATCCCAGATTTGTTCATGAAACGAGT 67730 Query 110894 TCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATGT 110953 | |||||| | |||||||||||||||||||| |||| ||||| || ||| Sbjct 67731 AGATTCAAATGGTGTTTGGTCTCTTATGTGTCCTCACATGGCTCCGGGTCTTTCCGATTG 67790 Query 110954 ATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCAAGTTTCGCAA 111013 | ||| |||| ||||| | || ||||| || ||||| || || || || | ||| Sbjct 67791 TTGGGGAGAAGAATTTGAGAAACTCTACGAGAAGTATGAGAATGAGGGGAATTACATCAA 67850 Query 111014 ACAAATTCCAGCTCAAGAACTTTGGTTCAAA---ATCCTTGAATCACAAGTTGAAACTGG 111070 |||| | | |||| ||||||||| ||| || ||| ||| |||||||||||||| Sbjct 67851 ACAAGTACAAGCTAGGGAACTTTGG---AAAGCTATTATTGTATCCCAAGTTGAAACTGG 67907 Query 111071 AACTCCTTATATTTTGTATAAAGATCATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130 ||||||||||| ||||| |||||| |||| | || || ||| |||| | || Sbjct 67908 CACTCCTTATATGTTGTACAAAGATGCCTGTAATAGAAAGAGCAACCAACAGAATCTTGG 67967 Query 111131 AACAATTAAGTCTAGTAATTTGTGC 111155 || || || ||||||||| ||| Sbjct 67968 TACCATCAAAAGTAGTAATTTATGC 67992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186653531947514