Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq38 123 6e-23 >seq38 Length=2283748 Score = 123 bits (136), Expect = 6e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || || ||||| |||||||||||||| ||| |||||||| |||| Sbjct 1208523 AAAACCTTGACGGGGAAAACCATCACTTTGGAAGTCGAACCATCTGACACCATCGAGAAT 1208582 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| || || ||||| |||||||| ||| ||||| ||| | ||||| ||| Sbjct 1208583 GTCAAGGCCAAAATCCAAGACAAAGAAGGGATTCCTCCGGATCAGCAACGTCTTATTTTC 1208642 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | ||||||||| | || | |||| || || ||||||| || ||| Sbjct 1208643 GCCGGCAAGCAGCTAGAAGATGGACGCACACTTTCCGACTATAATATCCAGAAGGAATCT 1208702 Query 206365 ACTCTTCACCTTGTTTTGAGACTTCG 206390 ||||||||| | ||| || | || || Sbjct 1208703 ACTCTTCACTTGGTTCTGCGTCTACG 1208728 Score = 95.1 bits (104), Expect = 3e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 204752 CGAAGTCTCAAAACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTC 204811 || || | || ||| | |||||||||||| || ||||||| ||||||||| | | || Sbjct 1208728 CGTAGACGCAGAACCAAGTGAAGAGTAGATTCCTTCTGGATATTATAGTCGGAAAGTGTG 1208669 Query 204812 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATAAGCCGTTGTTGA 204856 | ||||||||| |||||||| |||||||| ||||| ||||| ||| Sbjct 1208668 CGTCCATCTTCTAGCTGCTTGCCGGCGAAAATAAGACGTTGCTGA 1208624 Score = 93.3 bits (102), Expect = 1e-13 Identities = 139/195 (71%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| || || || || || |||||||||||||| ||| |||||||| ||||| Sbjct 1209435 AAAACCCTGACCGGCAAGACCATCACTTTGGAAGTCGAACCATCTGACACCATCGAAAAT 1209494 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || ||||| || || || ||| || || || || | ||||| Sbjct 1209495 GTGAAAGCGAAA-ATCCAAGACAAGGAGGGGATTCCCCCAGATCAGCAGAGGTTGATCTT 1209553 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||| |||||| ||||||| || | || | |||| || ||| | ||||| ||||| Sbjct 1209554 TGCCGGCAAGCAGCTGGAAGACGGTCGTACCCTTTCCGACTATAACATTCAGAAGGAGTC 1209613 Query 206364 TACTCTTCACCTTGT 206378 || || || || || Sbjct 1209614 GACGCTCCATCTAGT 1209628 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181662201864554