Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq1407 102 3e-18 seq10 102 3e-18 seq2001 98.7 3e-17 seq14 96.9 1e-16 seq811 95.1 4e-16 seq36 95.1 4e-16 >seq1407 Length=127900 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 || ||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 46443 TACGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 46502 Query 2825 AACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 46503 GATCCCGGGTTTCGGC 46518 >seq10 Length=2296533 Score = 102 bits (112), Expect = 3e-18 Identities = 73/83 (88%), Gaps = 1/83 (1%) Strand=Plus/Minus Query 2759 TGTGTTTATG-GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCC 2817 ||| ||||| || ||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct 2208446 TGTTTTTATAAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCC 2208387 Query 2818 CTGGTTCAACCCCGGGCTTCAGC 2840 ||||||| | |||||| ||| || Sbjct 2208386 CTGGTTCGATCCCGGGTTTCGGC 2208364 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1964894 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1964953 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 1964954 CCTGGTTTCGGC 1964965 >seq2001 Length=74288 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 64209 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 64268 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 64269 CCGGGTTTCGGC 64280 >seq14 Length=1983830 Score = 96.9 bits (106), Expect = 1e-16 Identities = 62/68 (91%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1814401 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1814342 Query 2829 CCGGGCTT 2836 ||||| || Sbjct 1814341 CCGGGTTT 1814334 >seq811 Length=277186 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 7165 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 7224 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 7225 CCTGGTTTCGGC 7236 >seq36 Length=1449386 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 493342 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 493283 Query 2829 CCGGGCTTCAGC 2840 || || ||| || Sbjct 493282 CCTGGTTTCGGC 493271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15847784279730