Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq38 118 9e-22 seq747 100 3e-16 seq365 95.1 1e-14 >seq38 Length=2283748 Score = 118 bits (130), Expect = 9e-22 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | ||||||||||| || || || || | ||||| | || |||||| | | Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 |||||||| || | || || |||||| || ||||| || || || || || ||| Sbjct 1208796 GATACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAG 1208855 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| |||| |||| | ||||||||| || ||||||| | | | | || ||| || ||| Sbjct 1208856 CAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAAT 1208915 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTG 25384 ||||| |||||||| ||| |||| || ||| Sbjct 1208916 ATTCAGAAAGAATCGACCCTTCACTTGGTG 1208945 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | ||||| ||||| || || ||||| | ||||| | || || ||| | | Sbjct 1209192 ATGCAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTCC 1209251 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || ||| | || || ||||| || ||||| || || || || |||||| Sbjct 1209252 GATACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCAG 1209311 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | || |||| | |||||| || || ||||||| | | | ||| |||||| Sbjct 1209312 CAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAAT 1209371 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || ||||||||||||||| |||| || || Sbjct 1209372 ATCCAAAAAGAATCCACCCTTCACTTGGT 1209400 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| | || |||||||| || || ||||| | ||||| | ||||||||| | | Sbjct 1208964 ATGCAGATCTTCGTAAAAACCTTGACGGGAAAGACCATCACTCTGGAAGTCGAACCATCC 1209023 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 ||||| || ||| | || || ||||| || || ||||| || || || || ||| Sbjct 1209024 GATACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAGGAGGGGATTCCCCCAGACCAG 1209083 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||| | || |||| | |||||| || || ||||||| | | | || |||||| Sbjct 1209084 CAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCTGACTACAAT 1209143 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGT 25383 || ||||||||||||||| |||| || || Sbjct 1209144 ATCCAAAAAGAATCCACCCTTCACTTGGT 1209172 >seq747 Length=644639 Score = 100 bits (110), Expect = 3e-16 Identities = 163/230 (71%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || ||||| | || || ||| | |||||| | || |||||| ||| | Sbjct 452935 ATGCAAATTTTCGTGAAAACCCTCACGGGGAAAACTATCACGCTAGAGGTCGAA-CCATC 452993 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 ||||||||||| | || ||| ||||| || |||||||| || || || ||||| Sbjct 452994 TGATACTATCGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGGATTCCTCCAGATCA 453053 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAG--AAATGTCAGCGATTAC 25351 |||| | || || | || || |||||||| ||||||| | | |||| || ||| Sbjct 453054 GCAACGTCTGATCTTCGCTGGTAAACAACTTGAAGATGGACGTACATTGTC--TGACTAC 453111 Query 25352 AATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 || || || || || || ||| |||| || || || | |||||||| || Sbjct 453112 AACATCCAGAAGGAGTCTACCCTTCACTTGGTATTGCGTTTGAGAGGTGG 453161 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || |||||||| | || || ||| | |||||| | || ||||| ||| | Sbjct 462718 ATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACTATCACGCTAGAGGTCGA-GCCTTC 462660 Query 25235 -GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || || || | || ||| ||||| || |||||||| || || || ||||| Sbjct 462659 TGACACAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAGGGCATTCCTCCTGATCA 462600 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 || | | || | || ||||||||||| ||||||| | | | | || ||||| Sbjct 462599 ACAGCGTTTGATCTTCGCAGGCAAACAACTTGAAGATGGACGTACTCTTTCTGACTACAA 462540 Query 25354 TATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||| ||||| ||||| ||| |||| || || ||| | ||||| || || Sbjct 462539 TATCCAAAAGGAATCAACCCTTCACTTGGTTTTACGGTTGAGGGGCGG 462492 >seq365 Length=450407 Score = 95.1 bits (104), Expect = 1e-14 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 25171 CAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGC 25230 ||||||||| | ||||||||||| || || || || | ||||| | || || ||| | Sbjct 426271 CAACATGCAGATTTTTGTAAAAACTTTGACAGGTAAGACCATCACCCTTGAGGTTGAACC 426330 Query 25231 CAACGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGA 25290 ||||| |||||| | || ||| ||| || || ||||| ||||| || || || Sbjct 426331 GTCAGATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAAGAAGGTATCCCCCCTGA 426390 Query 25291 TCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTA 25350 ||||||| | || |||| || || ||||| | ||||||| | | | ||| || Sbjct 426391 TCAGCAACGTCTAATTTTCGCTGGGAAACAGTTAGAAGATGGACGTACCTTATCCGACTA 426450 Query 25351 CAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGA 25390 || ||||| || ||||| || ||||| | ||||| ||| Sbjct 426451 TAACATTCAGAAGGAATCAACGCTTCATCTCGTGTTGAGA 426490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445036126015680