Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq349 107 3e-17 seq877 102 1e-15 >seq349 Length=550016 Score = 107 bits (118), Expect = 3e-17 Identities = 350/534 (66%), Gaps = 11/534 (2%) Strand=Plus/Plus Query 1455743 CGCTTTGTCCTGTTCCCCATCCGCTACCAGCGGATAT--GGGAAATGTACCAAAAAGGCC 1455800 |||||||| | |||||||||| |||| | ||||| ||| | ||| || ||| || Sbjct 192082 CGCTTTGTTATATTCCCCATCCAGTACC--CCGATATTTGGGCCAAATACAAAGAAG-CC 192138 Query 1455801 GAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTG 1455860 || || || ||||||||| | ||||| || || | || | || |||||||| Sbjct 192139 GAAGCTTCATTTTGGACCACAGAGGAAGTGGATTTATCTAAGGATATGGATCACTGGGTA 192198 Query 1455861 TCGCTGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAG 1455920 || || |||| | |||||||| ||||| ||||| ||||| ||| || Sbjct 192199 AGACTTTCTGATAACGAAAGGCATTTCATATCACACGTTCTCGCGTTTTT-CGCTGCTTC 192257 Query 1455921 CGATGGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGA 1455980 |||||| || || ||||| || | | | || | |||| || || | |||| Sbjct 192258 CGATGGAATAGTAAATGAGAATCTAGTAGAAAGATTCAGCCAAGAAGTTCAGGTAACAGA 192317 Query 1455981 GGCACGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTC 1456040 |||||||| ||||| || ||||| || || ||||| || ||||| || |||| ||| Sbjct 192318 GGCACGTTGCTTTTATGGTTTCCAAATAGCTATCGAGAATATCCATTCAGAAATGTACAG 192377 Query 1456041 GCTCCTGATCGACACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCAT 1456100 | ||||||| || || | | || || | || ||| ||| || || || Sbjct 192378 CATGTTGATCGAAACTTATATTACCGATCCTAAACAAAAAGACTTCCTTTTCAATGCTAT 192437 Query 1456101 CGACACGGTGCCGTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGA 1456160 || || |||| | || | || ||||| || ||||| | || ||||| ||| | | Sbjct 192438 TGAGACCCTGCCTTGTGTTCGTAAGAAGGCTGATTGGGCTTTAAACTGGATAAACTCGAA 192497 Query 1456161 GGGCCTCG-ACACTTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTT 1456218 | | | | ||| || | || || || ||| ||| || || || || || || ||||| Sbjct 192498 GAG--TAGTACA-TTCGGGGAAAGGATCATCGCCTTCGCAGCGGTAGAAGGTATATTTTT 192554 Query 1456219 CTCGGGCAGTTTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 ||| ||||| ||| || || || ||||| || || || ||| | ||||| || Sbjct 192555 CTCTGGCAGCTTCGCGGCTATATTCTGGCTAAAAAAACGAGGCTTAATGCCTGG 192608 >seq877 Length=360452 Score = 102 bits (112), Expect = 1e-15 Identities = 125/171 (73%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 2133536 CGCCCTCTTTGACGAGGCGTCGGACGAGATGGTGACGGTGCGCGATATTGACTTTTTCTC 2133595 |||| |||| ||||||| ||||| |||||| |||| || || || | ||||| Sbjct 232316 CGCCATCTTCGACGAGGACCACGACGAAATGGTGGTGGTGAAGGACATCGAGATGTTCTC 232257 Query 2133596 CATGTGCGAGCACCACCTGCTGCCCTTTATCGGCAAGGCCCACGTGGGCTACCTGCCCGC 2133655 ||||||||||||||||||| ||||||| ||| |||| | | | || ||| ||||| Sbjct 232256 CATGTGCGAGCACCACCTGGTGCCCTTCTACGGGAAGGTCTCCATCGGGTACTTGCCCTG 232197 Query 2133656 GGGCAAGATCATCGGTCTGAGCAAGATCCCGCGCATCGTCGACATGTTTTC 2133706 ||||||||| |||| || |||||| | | | ||||| || || | ||| Sbjct 232196 CGGCAAGATCCTCGGCCTCAGCAAGCTGGCCAGGATCGTGGAAATATATTC 232146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7176800963448788