Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq38 132 4e-26 seq365 95.1 1e-14 seq747 82.4 7e-11 >seq38 Length=2283748 Score = 132 bits (146), Expect = 4e-26 Identities = 168/231 (73%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | ||||| || || || ||||| || |||||||| || | | Sbjct 1208506 CCACCACGGAGACGGAGTACCAAGTGCAAGGTGGATTCCTTCTGGATGTTGTAGTCCGAC 1208447 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| ||| |||| |||| ||| || || || || ||||||| |||||| || | ||| Sbjct 1208446 AAGGTACGCCCGTCCTCCAACTGTTTGCCGGCGAAGATCAACCTCTGCTGATCGGGAGGG 1208387 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||| |||||| |||||| ||||| | | | |||||| || |||||| Sbjct 1208386 ATGCCCTCTTTGTCCTGGATCTTGGCCTTCACGTTCTCGATGGTGTCGGACGGCTCCACC 1208327 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCATTCTG 35740 || | ||||| |||||||| |||| || ||||| || |||||||||||| Sbjct 1208326 TCGAGGGTGATAGTTTTACCAGTCAGTGTCTTCACGAAGATCTGCATTCTG 1208276 Score = 116 bits (128), Expect = 3e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 35527 CACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||| | ||| | ||| |||||| |||||||| || |||| | ||| || |||| || Sbjct 1209629 CACTAGATGGAGCGTCGACTCCTTCTGAATGTTATAGTCGGAAAGGGTACGACCGTCTTC 1209570 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 ||||||||| || ||||| ||||||| |||||| || | |||| | ||||||||| Sbjct 1209569 CAGCTGCTTGCCGGCAAAGATCAACCTCTGCTGATCTGGGGGAATCCCCTCCTTGTCTTG 1209510 Query 35647 GATCTTTTGC-TTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||| ||| || |||| | || | | ||||| | ||| || |||| ||||| || | Sbjct 1209509 GAT-TTTCGCTTTCACATTTTCGATGGTGTCAGATGGTTCGACTTCCAAAGTGATGGTCT 1209451 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || |||| |||||||| || |||||||| Sbjct 1209450 TGCCGGTCAGGGTTTTCACGAAGATCTGCAT 1209420 >seq365 Length=450407 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | |||||||| | ||| | ||| ||||| |||||||| || |||| Sbjct 426501 CCACCACGGAGTCTCAACACGAGATGAAGCGTTGATTCCTTCTGAATGTTATAGTCGGAT 426442 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 ||||| || | || || | ||| || || || || || | || ||||| || | || Sbjct 426441 AAGGTACGTCCATCTTCTAACTGTTTCCCAGCGAAAATTAGACGTTGCTGATCAGGGGGG 426382 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | | || ||||| ||||||| || | | | | | || || || ||| ||| Sbjct 426381 ATACCTTCTTTGTCTTGGATCTTTGCTTTGACATTCTCGATGGTATCTGACGGTTCAACC 426322 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || ||||| ||||||||||| ||||| |||||||| Sbjct 426321 TCAAGGGTGATGGTCTTACCTGTCAAAGTTTTTACAAAAATCTGCAT 426275 >seq747 Length=644639 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| || ||||| || | | || || | || || || || || || || || Sbjct 462528 TCCTTTTGGATATTGTAGTCAGAAAGAGTACGTCCATCTTCAAGTTGTTTGCCTGCGAAG 462587 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTT 35665 ||||| ||||| || || | ||||| || ||| |||||| ||| ||| |||| | ||| Sbjct 462588 ATCAAACGCTGTTGATCAGGAGGAATGCCCTCTTTGTCCTGGAT-TTTAGCTTTAACGTT 462646 Query 35666 GCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | || ||||| | |||||| ||||||||||| | ||||| || Sbjct 462647 TTCTATTGTGTCAGAAGGCTCGACCTCTAGCGTGATAGTTTTACCCGTGAGGGTTTTTAC 462706 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 462707 GAAAATTTGCAT 462718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450734579847920