Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq747 127 2e-24 seq38 123 3e-23 seq1096 96.9 4e-15 >seq747 Length=644639 Score = 127 bits (140), Expect = 2e-24 Identities = 157/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 || || || | ||| || || ||||||||||| || |||||||| || || | Sbjct 462504 CGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAAGAGTACGTCCA 462563 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || || ||||||||||| || ||||||||||| ||||| || || ||||| ||||| Sbjct 462564 TCTTCAAGTTGTTTGCCTGCGAAGATCAAACGCTGTTGATCAGGAGGAATGCCCTCTTTG 462623 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || ||||| ||| || || | |||||| || | || || || || || || Sbjct 462624 TCCTGGATTTTAGCTTTAACGTTTTCTATTGTGTCAGAAGGCTCGACCTCTAGCGTGATA 462683 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| || | ||||| |||||||||||||| Sbjct 462684 GTTTTACCCGTGAGGGTTTTTACGAAAATTTGCAT 462718 Score = 122 bits (134), Expect = 9e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 134499 CGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAG 134558 || || || | ||| || || ||||||||||| || |||||||| | ||| | Sbjct 465980 CGTAAAACCAAGTGAAGGGTTGATTCCTTTTGGATATTGTAGTCAGAAGGAGTGCGCCCA 466039 Query 134559 TCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTT 134618 || || || ||||| || || || ||||||||||| |||||||| || || |||||||| Sbjct 466040 TCTTCTAGTTGTTTACCCGCGAAGATCAAACGCTGTTGATCGGGAGGAATACCTTCTTTG 466099 Query 134619 TCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATG 134678 || || ||||| ||| || || | || ||| || | || || || || || ||| Sbjct 466100 TCCTGGATTTTAGCTTTAACGTTTTCTATTGGGTCAGAAGGCTCGACCTCTAGCGTGATG 466159 Query 134679 GTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| |||| ||||| |||||||||||||| Sbjct 466160 GTCTTACCCGTTAGGGTTTTTACGAAAATTTGCAT 466194 Score = 109 bits (120), Expect = 6e-19 Identities = 165/232 (71%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| | ||||| || | ||| || || || ||||| || ||||||||||| | | Sbjct 453161 CCACCTCTCAAACGCAATACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAC 453102 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 || | | | || || || ||||| || || || |||| ||| |||||||| || || Sbjct 453101 AATG-TACGTCCATCTTCAAGTTGTTTACCAGCGAAGATCAGACGTTGCTGATCTGGAGG 453043 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCAC 134665 || || ||||| ||||| ||||| ||| || || | || || || | ||| || Sbjct 453042 AATCCCCTCTTTGTCTTGGATTTTAGCTTTCACATTTTCGATAGTATCAGATGGTTCGAC 452983 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717 || || || || ||||| || || | ||||| ||||||||||||||| || Sbjct 452982 CTCTAGCGTGATAGTTTTCCCCGTGAGGGTTTTCACGAAAATTTGCATTGTG 452931 >seq38 Length=2283748 Score = 123 bits (136), Expect = 3e-23 Identities = 150/202 (74%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 134517 GTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCC 134575 ||||||||||| || ||||||||||| | ||| ||| | ||| || | ||||||||| Sbjct 1208476 GTGGATTCCTTCTGGATGTTGTAGTCCGACAA-GGTACGCCCGTCCTCCAACTGTTTGCC 1208418 Query 134576 TGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTTTGTTT 134635 || || ||||| | |||||||||||| || ||||| ||||| || || || || || Sbjct 1208417 GGCGAAGATCAACCTCTGCTGATCGGGAGGGATGCCCTCTTTGTCCTGGATCTTGGCCTT 1208358 Query 134636 GACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTTAAAGT 134695 || || | |||||||||| ||||| ||||| || || |||||||| || | || Sbjct 1208357 CACGTTCTCGATGGTGTCGGACGGCTCCACCTCGAGGGTGATAGTTTTACCAGTCAGTGT 1208298 Query 134696 TTTAACGAAAATTTGCATTTTG 134717 || ||||| || |||||| || Sbjct 1208297 CTTCACGAAGATCTGCATTCTG 1208276 Score = 113 bits (124), Expect = 5e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| | ||| || || ||||| || ||||| || |||||| | ||| || Sbjct 1208953 AGACGGAGCACCAAGTGAAGGGTCGATTCTTTCTGAATATTATAGTCGGAGAGAGTGCGA 1208894 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615 || || ||||||||||| |||||||| | || ||||| || || || || |||||| Sbjct 1208893 CCATCTTCTAGCTGTTTGCCGGCAAAAATAAGTCGTTGCTGGTCTGGGGGAATCCCTTCT 1208834 Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCACGTCGAGAGT 134674 || ||||||||||| || | || | |||| || ||||||| ||| || || | || Sbjct 1208833 TTGTCTTGAATTTTGGCCTTCA-CGTTTTCAATAGTATCGGACGGTTCGACCTCCAAGGT 1208775 Query 134675 AATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || ||||| || || || ||||| Sbjct 1208774 GATGGTCTTGCCCGTCAAGGTTTTTACAAAGATCTGCAT 1208736 >seq1096 Length=295351 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/285 (68%), Gaps = 2/285 (1%) Strand=Plus/Plus Query 7534 AAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGTGGCGGTGGGC 7593 ||||||||||| | | ||||| ||| |||||||| || | || || ||||| Sbjct 67177 AAAATCAACGGGAAGATTGTTGAACGCCCTCAGCACATGCTCATGAGAGTCGCTGTGGGA 67236 Query 7594 ATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTCTTTGAAACAG 7653 ||||| || |||||||| |||||||| | ||||| || | || | || | | | Sbjct 67237 ATTCATGGGGAAGACATAGACGCCGCTATAGAAACTTATAATTTGTTATCGGAAAGATAT 67296 Query 7654 TTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCAATTGTCCTCG 7713 || || ||||| || || | ||| ||||||| || | ||||||||||| || Sbjct 67297 TTCACACACGCAAGTCCAACTTTATTTTCCGCGGGTACTCCCAGACCTCAATTGTCTTCT 67356 Query 7714 TGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACACGCT-GCGCGA 7772 |||||| | |||| |||| || || || || || || |||| |||| || |||| | Sbjct 67357 TGTTTTCTTCTAATGATGCCAGACGATAGTATTGAGGGTATTTTCAACTGCCTGGCGC-A 67415 Query 7773 TTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGT 7817 ||||| ||||||| || | | || || || ||| | ||||| Sbjct 67416 ATGCGCTTATATTTCTAAGTCAGCGGGAGGTATTGGTGTCAACGT 67460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505332230714480