Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1096 535 6e-147 seq349 320 2e-82 seq17 96.9 5e-15 >seq1096 Length=295351 Score = 535 bits (592), Expect = 6e-147 Identities = 1248/1873 (67%), Gaps = 31/1873 (2%) Strand=Plus/Minus Query 68365 TTATCCAATGTAAACTGAATGGGTGAGGATGCGGGTTTTGTACGTAGATAGTACATACCG 68424 || |||| |||||||| || ||| || ||||||||||| | | ||||||||| || Sbjct 68969 TTGTCCACGGTAAACTGGATCGGTTTGGCAGCGGGTTTTGTTCTCAAATAGTACATGCCT 68910 Query 68425 GTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGTTTGGAATAACTTGGA 68484 || || || || | ||| |||||||| ||||| | || ||| |||| Sbjct 68909 GTCTTAAGCCCCTTGCGCCAGCCGTAGAAGTGCATCGACGAGAGGACACCATATGTTGGT 68850 Query 68485 TCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCTCCTCTATCTGCCGCC 68544 | | | ||||| |||| ||||| ||||| ||||| || || | ||| || ||| Sbjct 68849 TTTTCGACGTGAATGTTCAAACTCTGACTCTGATCAATGAAGGCCCCACGATCGGCGGCC 68790 Query 68545 ATTTTTATAATACTCTTT-TGAGGAATTTCCCAAATAGTCTTAAAAATCTGTTTGATATC 68603 || || | || | |||| || | ||| ||||| | ||||| |||| ||||| || Sbjct 68789 ATATTGAGGAT-CACTTTCTGCGAAATCTCCCAGACCGTCTTGTAAATAGCTTTGAGGTC 68731 Query 68604 ATCTGGAA-----GGCTCGTATTTTGAATGGATCCACCATCGGATATAATTATATTCTTG 68658 || |||| || ||| | || || || || | | || || ||| ||| || Sbjct 68730 TTCAGGAATATCAGGGACGT--TCTGGATAGAACCGCAGTTGGCTAAGATTTGATTTTTC 68673 Query 68659 ATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGCGGATTAACTATT 68718 ||| |||| ||||| || ||| || || || | || | ||| | || |||||| Sbjct 68672 ATCGTTTCATCCCACAGGCCTCGCTCTGTCAAGTCTTTGAGCAAATGGTGGTTGACTATT 68613 Query 68719 TGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGAT 68778 || ||||| || ||||| || | ||| |||||||| || ||| || ||||| | ||| Sbjct 68612 TGGAATTCGCCCGATAAGACCCGACGGGTGTAAATGTTTGAGGTGTAAGGTTCAATGGAT 68553 Query 68779 TCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCCACCAATAAACTA 68838 ||||| ||||| || || |||||||| || || || ||||||||||| | | || Sbjct 68552 TCATTGTTTCCAAGGATCTGAGCAGTGGAAGCTGTCGGCATAGGTGCTAAAAGTAGCGAG 68493 Query 68839 TTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCCCAAAGATCAGAT 68898 || |||| || ||| | || || ||||| || | |||||||||||| | | Sbjct 68492 TTCCTAACGCCGTGTTTCGCTATCTTTTCTTTCAGTGCTGCCCAATCCCAAAG----GCT 68437 Query 68899 GGTAC----AACATTCCAAAGATCGTATTGTAGAATTCCGTTACTTGCATATGATCCATT 68954 |||| ||| | ||| | || || |||| || || || || | ||||| Sbjct 68436 GGTAGGCGTAACGTCCCACATGTCATACTGTAAGATCCCTTTGCTAACGGGACTACCATT 68377 Query 68955 ATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCCTCTAATGCACCGTA 69014 || | ||||| || | ||||| |||| |||||||||||| || | ||| | || Sbjct 68376 GTAAGACGAATAAGTGCCCTTTTGTTCTGCTATTTCACAACTTGCTTCGAGCGCAGCATA 68317 Query 69015 ATAAATTGTTTCGAAAATCTTCTTATTGAG--ATCTTGTGCTTCTAGACTATCGAATGGA 69072 ||||| || ||||| |||| |||||||| | |||| ||||| || || || || Sbjct 68316 GTAAATCGTCTCGAATATCTGTTTATTGAGCAAACTTG--CTTCTTCGCTGTCAAAAGGC 68259 Query 69073 TAATGTAAAAGAATAAATGCATCTGCCAATCCCTGAACCCCAATACCGATAGGTCTATGT 69132 ||| || || ||||||||||| || || || ||||| || || || ||||| || Sbjct 68258 ATCCGTAGGAGTATGAATGCATCTGCTAAACCTTGTACCCCGATTCCTATGGGTCTGTGG 68199 Query 69133 CTCTTATTTGAACTTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTA 69192 | |||||||| |||| ||||| || |||||| || || | ||||| ||||||| Sbjct 68198 CGACTATTTGAATTTTCCGCTTCCTTAACAGGATAGTAGTTCACGTCTATTATTTTATCG 68139 Query 69193 AGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAAAATC--AAATCGTCCAT 69250 || |||| ||||| ||| | ||| || | | ||| || || | ||| Sbjct 68138 AGGTTTCTCGTTACTAATTTGGTGATGTCTTTCAACATATCAAAGTCGTAAGTTTTCCTG 68079 Query 69251 ----CTATAACAAACATATTCAGTGCTACAGATGCTAGATTACAAACTGCTACCTCATTA 69306 | | || |||||||| | |||| || |||| ||| || ||||| | || | Sbjct 68078 TCGGCCTTGACGAACATATTGACGGCTATCGAAGCTAAATTGCATACTGCGATTTCGTCC 68019 Query 69307 GAATTTGCATATTGTATTATCTCTGTACATAGATTACTACATTTGATAGTCCCCAGATTT 69366 | | ||||| || || || || |||| |||||||| |||||| || || ||||| Sbjct 68018 GGTGAAGTATATTCGATGATTTCCGTGCATAAATTACTACTTTTGATGGTACCAAGATTC 67959 Query 69367 TGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAAGAATAAACGGAGTACCAGTTTCA 69426 || || || |||||| | |||||||| || ||||| | ||| | ||||| ||||||||| Sbjct 67958 TGTTGGTTGCTCTTTCTATTACAGGCATCTTTGTACAACATATAAGGAGTGCCAGTTTCA 67899 Query 69427 ATCTGAGATTCGATAATAGATTTCCAAACGACCCTAGCATTTATTACGGTCTTGTAACGC 69486 | || ||| | ||||||| |||||||| ||||||| | || | | ||||| | Sbjct 67898 ACTTGGGATACAATAATAGCTTTCCAAAGTTCCCTAGCTTGTACTTGTTTGATGTAATTC 67839 Query 69487 TTCTCTTTTTCATATTGTGTATATAGCCGTTCGAATTCATCTCCCCAAACATCATCCAAT 69546 ||| || ||||| | || || || ||||| ||||||||| ||| | Sbjct 67838 CCCTCATTCTCATACTTCTCGTAGAGTTTCTCAAATTCTTCTCCCCAACAATCGGAAAGA 67779 Query 69547 CCAGGACATTCATTTG--GACACATCAATGACCACACATCATCATCCTTAACTCGTTTCA 69604 || ||| ||| || ||||||| | ||||| ||| ||| | |||||||||| Sbjct 67778 CCCGGAGC--CATGTGAGGACACATAAGAGACCAAACACCATTTGAATCTACTCGTTTCA 67721 Query 69605 TAAATAGATCGGGAATCCAAAGAGCTATAAAGAGATCTCTGGTTCTATTTTCTTCATTTC 69664 | || | ||| || ||||| | || ||| | |||||| | || | |||||| || | Sbjct 67720 TGAACAAATCTGGGATCCACAATGCATAAAATAAATCTCTTGCTCGGTATTCTTCCTTGC 67661 Query 69665 CTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATA 69724 | || || || || | || || ||||| | | ||||| |||||| ||||||| |||| Sbjct 67660 CAGTGTTCTTCTTTAAATTAAGGAACTCGAAGACATCAGCATGCCACGGTTCTAAGTATA 67601 Query 69725 TCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGTGTTATTAT 69784 | || | |||| ||||||||||| ||||| || || | || || || ||| ||||| Sbjct 67600 TTGCAAACGCTCCTGGTCGTTTATTGCCTCCTTGGTCGACATACCTTGCCGTGCTATTAA 67541 Query 69785 AGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAATATAACTTC 69844 | || ||||||| || | | ||| || || ||| || || || | |||||| ||| Sbjct 67540 AAACCTTCAGCATAGGTACTAGACCGTTCGACACACCGTTAGTGCCTGCAATATATGTTC 67481 Query 69845 CTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGAGATTAGAG 69904 || | || | ||||| || | ||| || ||||| || ||||| || || Sbjct 67480 CTTTGGCTCTGATATTGTGAACGTTGACACCAATACCTCCCGCTGACTTAGAAATATAAG 67421 Query 69905 CACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTTAAGAAGAA 69964 | || | || || | |||||||| || ||||| ||| ||| | ||||||| Sbjct 67420 CGCATTGCGCCAGGCAGTTGAAAATACCCTCAATACTATCGTCTGGCATCATTAGAAGAA 67361 Query 69965 AACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGATGCGTGAG 70024 |||| ||||| |||| | ||| ||||| |||||| || ||| |||||| | Sbjct 67360 AACAAGAAGACAATTGAGGTCTGGGAGTACCCGCGGAAAATAAAGTTGGACTTGCGTGTG 67301 Query 70025 TGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTCTATATCCCACTGAT 70084 |||| || |||| || | || ||| || ||||| ||||| | ||||| || | || Sbjct 67300 TGAAATATCTTTCCGATAACAAATTATAAGTTTCTATAGCGGCGTCTATGTCTTCCCCAT 67241 Query 70085 GAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTTTTATTATTTA 70144 ||||||| | ||||| | ||| | ||| |||||||| ||||| || | || || | Sbjct 67240 GAATTCCCACAGCGACTCTCATGAGCATGTGCTGAGGGCGTTCAACAATCTTCCCGTTGA 67181 Query 70145 TTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTATGAAAAGTCTC 70204 |||| | ||| || || || |||||||| || || || || ||||| || ||||| | Sbjct 67180 TTTTGAGCAGATAGGAACGCTCAAGAGTTTTGAAACCGAAGTAATTGTAGGAGAAGTCCC 67121 Query 70205 TTTCGTAAATAAT 70217 | || || || || Sbjct 67120 TGTCATATATGAT 67108 >seq349 Length=550016 Score = 320 bits (354), Expect = 2e-82 Identities = 610/894 (68%), Gaps = 11/894 (1%) Strand=Plus/Minus Query 39311 GACATAACTCCCATTTTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCT 39370 || ||||| ||| ||| ||||| || || || |||||||| || ||||||||||| Sbjct 192974 GAAATAACGCCCTCTTTCTGGTACTCGCCGACTTTCTTCTCGAAGAAGTTAGTTTTGCCA 192915 Query 39371 TCCAATGATATATTTTCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAAT 39430 || || ||| | ||||||||| || |||||||| | ||||| | |||| | | Sbjct 192914 TCAGTGGAAATAATGGTCATGAAATCGAAAGGATTAGTGGAGTTATAAATCTTTTCACAA 192855 Query 39431 CCTAATTCTGAAATCAATCTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAA 39490 || | ||| | || ||| || || || |||||||| || || ||| | | ||| Sbjct 192854 CCGAGTTCAGTAAGCAACCTGTCGGCGACAAATTCGATATACTGGCACATGAGCTTGCAA 192795 Query 39491 TTCATTCCTATGAGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACG 39550 |||||||| ||||| | || |||| || || | ||||| |||| |||||| | || Sbjct 192794 TTCATTCCAATGAGGCTTACGGGTAAGGCATCGGACAGAAATTCTTGTTCGATAGCAACA 192735 Query 39551 GCCTCTGTTATTATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAAC 39610 || ||| ||||| | ||| || | | |||| || | | || ||| Sbjct 192734 GCATCTCGAATTATACCTACGACTCGATCCTTAGACGGTTTCTGTACGAGATACGAGAAC 192675 Query 39611 ATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAAT 39670 | || ||| || ||||| ||||||| || ||||||||| || ||||| ||||| ||| Sbjct 192674 AGTAGGCAAGCAAAGTCGCAATGTAACCCTTCATCTCTAGAGATCAATTCATTAGAGAAT 192615 Query 39671 GTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAA 39730 || | |||||||||| || || ||||| ||||| ||||| || || || ||||| Sbjct 192614 GTTAAGCCAGGCATTAAGCCTCGTTTTTTTAGCCAGAATATAGCCGCGAAGCTGCCAGAG 192555 Query 39731 AAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTA 39790 || || || |||||||| ||||| || || | | || || ||| | | || || Sbjct 192554 AAAAATATACCTTCTACCGCTGCGAAGGCGATGATCCTTTCCCCGAATGTACTACTCTTC 192495 Query 39791 ---TGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATA 39847 | |||||| || ||||||||||| ||||| |||||||||| || || ||| Sbjct 192494 GAGTTTATCCAGTTTAAAGCCCAATCAGCCTTCTTACGAACACAAGGCAGGGTCTCAATA 192435 Query 39848 GCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTA 39907 ||||| || || | | ||||| | | ||| ||| ||| || || || |||| || Sbjct 192434 GCATTGAAAAGGAAGTCTTTTTGTTTAGGATCGGTAATATAAGTTTCGATCAACATGCTG 192375 Query 39908 TACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCA 39967 ||||||||||||||||| || || || || || || || || ||||| || | ||| || Sbjct 192374 TACATTTCTGAATGGATATTCTCGATAGCTATTTGGAAACCATAAAAGCAACGTGCCTCT 192315 Query 39968 GTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTA 40027 || | || || ||| | |||||||| | | ||| ||||| ||||||||||| | Sbjct 192314 GTTACCTGAACTTCTTGGCTGAATCTTTCTACTAGATTCTCATTTACTATTCCATCGGAA 192255 Query 40028 GCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTC---ATC-GGGTGTCAATTT 40083 || || ||||| || | || ||| || |||| |||| ||| | ||| || Sbjct 192254 GCAGCGAAAAACGCGAGAACGTGTGATATGAAATGCCTTTCGTTATCAGAAAGTC---TT 192198 Query 40084 ATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTC 40143 | ||||| || ||||| || |||| ||| ||||| || | |||||||| || || || Sbjct 192197 A-CCCAGTGATCCATATCCTTAGATAAATCCACTTCCTCTGTGGTCCAAAATGAAGCTTC 192139 Query 40144 TGCCTTTTTGTACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAA 40197 || | |||||| || ||| ||||| | || || || || || |||||||| Sbjct 192138 GGCTTCTTTGTATTTGGCCCAAATATCGGGGTACTGGATGGGGAATATAACAAA 192085 >seq17 Length=2144227 Score = 96.9 bits (106), Expect = 5e-15 Identities = 329/498 (66%), Gaps = 15/498 (3%) Strand=Plus/Plus Query 163021 TTAGAAGGGTTGGTTTTAAAAGATATTAATGGAATATACGAGCCAGGAAAACGTAGATGG 163080 |||||||| |||| || ||||| || || | |||||||| || || ||| | ||| Sbjct 1931284 TTAGAAGGTCTGGTGTTGAAAGACATGAAAAGTATATACGAACCTGGTAAAAGGCACTGG 1931343 Query 163081 CTTAAAATAAAGAAAGACTACTTGAACAATGGTTCAATGGCAGACTCTGCAGATTTAGTA 163140 | || | || || |||||| | | ||| | ||||| || | ||||||||| | Sbjct 1931344 TTGAAGGTGAAAAAGGACTACCTCTTCGGTGGGGCGATGGCGGATACAGCAGATTTAATC 1931403 Query 163141 GTACTTGGGGCATATTATGGAAAAGGAATAAAGGGTGGAATGATGGCTGTCTTTTTGATG 163200 || | ||||| | ||||||| ||| | || || ||||||||| | || || |||||| Sbjct 1931404 GTTTTAGGGGCTTGGTATGGAACAGGCAAGAAAGGAGGAATGATGTCCGTTTTCTTGATG 1931463 Query 163201 GGTTGCTATGATGACGAGTCTGGTAAATGGAAGACAGTAACTAAATGT----TCCGGACA 163256 |||||||| || | | |||| || || || ||| || | || || Sbjct 1931464 GGTTGCTACAATCCGAACAATAAAAAATTCTGCACCGTTACCAAA-GTCCACACTGGTCA 1931522 Query 163257 CGATGATAATAC-GTTAAGGGTTCTACAAGACCAATTAAAGATGATTAAAATTAGTAAGG 163315 || ||||| || || || | ||||| || | | ||| | ||||| ||| ||| Sbjct 1931523 TGACGATAAAACTCTTGAGAAAT-TACAAACGGAACTTGACATGGTAAAAATCAGTCAGG 1931581 Query 163316 ATCCaaaaaaaGTACCAGAGTGGTTGGTAGTTAATAAAATCTAT-ATTCCAGATTTTGTA 163374 | |||||| |||| ||||| | | | || | || | || |||||||| Sbjct 1931582 ACATGTCAAAAGTGCCAGGTTGGTT-AAATTGCACCAAGACGATGGTGCCGGATTTTGTC 1931640 Query 163375 GC-AGAGGATCCAAAACAATC-TCCTATCTGGGAAATTTCAGGAGCTGAGTTTACTTCAT 163432 || ||| || || ||| |||| ||| | |||||||| | ||||| ||||| || || Sbjct 1931641 GCTAGA-GACCCTAAA-AATCAACCTGTATGGGAAATCACGGGAGCAGAGTTCAC-ACAG 1931697 Query 163433 C-CAAATCTCATACAGCAAATGGAATATCCATTAGATTTCCTAGATTTACTAGGATCAGA 163491 | | | |||||| || ||||||| || || || ||||| ||| |||| ||||| || Sbjct 1931698 CACGATGTTCATACGGCGGATGGAATTTCTATCAGGTTTCCAAGAGTTACAAGGATTAGG 1931757 Query 163492 AATGATAAAACGTGGAAA 163509 | |||||| |||||| Sbjct 1931758 GACGATAAAGACTGGAAA 1931775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686818866465360