Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anoplophora_20glabripennis_20[refseq_20GCF_5F000390285.1_202013-05- 14] 10,474 sequences; 707,727,967 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq38 168 8e-37 seq747 154 2e-32 seq365 136 5e-27 seq233 118 1e-21 >seq38 Length=2283748 Score = 168 bits (186), Expect = 8e-37 Identities = 174/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||||||||||||||| || | || || ||||| || || | |||||||| | Sbjct 1209191 AATGCAAATCTTTGTCAAAACCTTGACGGGAAAGACCATCACCTTGGAGGTTGAACCGTC 1209250 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||||| || ||||||| ||||| || ||||| || || ||||| ||||| || Sbjct 1209251 CGATACCATTGAGAACGTGAAGGCCAAAATCCAAGACAAAGAAGGGATTCCCCCAGATCA 1209310 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||| |||||||| || ||||| || || |||| || ||||| | ||||| || Sbjct 1209311 GCAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCCGACTACAA 1209370 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | ||||||| |||||||| ||||| | || ||||||| || ||||| Sbjct 1209371 TATCCAAAAAGAATCCACCCTTCACTTGGTTCTGCGTCTCCGTGGTGG 1209418 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || | || || ||||| || ||||| || || || || Sbjct 1208964 ATGCAGATCTTCGTAAAAACCTTGACGGGAAAGACCATCACTCTGGAAGTCGAACCATCC 1209023 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| || | ||||| ||||| || ||||||||||| ||||| ||||||||| Sbjct 1209024 GATACCATTGAGAACGTCAAGGCCAAAATCCAAGACAAGGAGGGGATTCCCCCAGACCAG 1209083 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || ||||| |||||||| || ||||| || || |||| || ||||| | ||||| ||| Sbjct 1209084 CAACGTCTTATTTTTGCCGGCAAGCAGCTAGAAGATGGACGCACCCTTTCTGACTACAAT 1209143 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 ||||||| |||||||| ||||| | || | ||||| || |||||| Sbjct 1209144 ATCCAAAAAGAATCCACCCTTCACTTGGTTCTACGTCTCCGTGGTGGA 1209191 Score = 149 bits (164), Expect = 7e-31 Identities = 169/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||| || || | || |||||||| || || | ||||| || | Sbjct 1208736 ATGCAGATCTTTGTAAAAACCTTGACGGGCAAGACCATCACCTTGGAGGTCGAACCGTCC 1208795 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| |||| ||| ||||||| |||||||| ||||| || || ||||| ||||||||| Sbjct 1208796 GATACTATTGAAAACGTGAAGGCCAAAATTCAAGACAAAGAAGGGATTCCCCCAGACCAG 1208855 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || |||||||| || || || || || |||| ||| || || | ||||||||| Sbjct 1208856 CAACGACTTATTTTTGCCGGCAAACAGCTAGAAGATGGTCGCACTCTCTCCGACTATAAT 1208915 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | || || ||||| || ||||| | || | |||||||| ||||| Sbjct 1208916 ATTCAGAAAGAATCGACCCTTCACTTGGTGCTCCGTCTTCGTGGTGG 1208962 Score = 149 bits (164), Expect = 7e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || || || || ||||||||||| || ||| | || || || || | Sbjct 1209420 ATGCAGATCTTCGTGAAAACCCTGACCGGCAAGACCATCACTTTGGAAGTCGAACCATCT 1209479 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | |||| |||| || ||||| || ||||||||||| ||||| ||||| ||| Sbjct 1209480 GACACCATCGAAAATGTGAAAGCGAAAATCCAAGACAAGGAGGGGATTCCCCCAGATCAG 1209539 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||| | | || ||||| || ||||| || || || | ||||||||| | |||||||| Sbjct 1209540 CAGAGGTTGATCTTTGCCGGCAAGCAGCTGGAAGACGGTCGTACCCTTTCCGACTATAAC 1209599 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGACA 27635 | || ||||| || || || |||||||| | || || || || || || Sbjct 1209600 ATTCAGAAGGAGTCGACGCTCCATCTAGTGCTTCGACTCCGTGGAGGGCA 1209649 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| || ||||| || || || || ||||| || || ||||| ||| | Sbjct 1208279 AATGCAGATCTTCGTGAAGACACTGACTGGTAAAACTATCACCCTCGAGGTGGAGCCGTC 1208338 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 || | ||| | || ||||||| || || |||||||| ||||| || ||||| || || Sbjct 1208339 CGACACCATCGAGAACGTGAAGGCCAAGATCCAGGACAAAGAGGGCATCCCTCCCGATCA 1208398 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||| | | || || || || || || | ||||| | |||||| | | ||||| || Sbjct 1208399 GCAGAGGTTGATCTTCGCCGGCAAACAGTTGGAGGACGGGCGTACCTTGTCGGACTACAA 1208458 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| | || | || | ||||| || ||||| Sbjct 1208459 CATCCAGAAGGAATCCACCTTGCACTTGGTACTCCGTCTCCGTGGTGG 1208506 >seq747 Length=644639 Score = 154 bits (170), Expect = 2e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| || || || || || || || || ||||| || || ||||| || || Sbjct 452934 AATGCAAATTTTCGTGAAAACCCTCACGGGGAAAACTATCACGCTAGAGGTCGAACCATC 452993 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| || | |||| |||| |||||||| || ||||| ||||| ||||||||||| || Sbjct 452994 TGATACTATCGAAAATGTGAAAGCTAAAATCCAAGACAAAGAGGGGATTCCTCCAGATCA 453053 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||||| || || |||||||| ||||| || |||| ||||| | | ||||| || Sbjct 453054 GCAACGTCTGATCTTCGCTGGTAAACAACTTGAAGATGGACGTACATTGTCTGACTACAA 453113 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || ||||| | || |||||| | | ||||| Sbjct 453114 CATCCAGAAGGAGTCTACCCTTCACTTGGTATTGCGTTTGAGAGGTGG 453161 Score = 138 bits (152), Expect = 1e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || |||||||| || || || || || || || || ||||| || || ||||| ||| | Sbjct 462721 ATTATGCAAATTTTCGTAAAAACCCTCACGGGTAAAACTATCACGCTAGAGGTCGAGCCT 462662 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||| | || | ||| | || |||||||| |||||||| ||||| |||||||| || Sbjct 462661 TCTGACACAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAGGGCATTCCTCCTGAT 462602 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || |||||| | || || || || || ||||| || |||| ||||| || | ||||| Sbjct 462601 CAACAGCGTTTGATCTTCGCAGGCAAACAACTTGAAGATGGACGTACTCTTTCTGACTAC 462542 Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608 ||| ||||||||||||| || ||||| Sbjct 462541 AATATCCAAAAGGAATCAACCCTTCA 462516 Score = 123 bits (136), Expect = 3e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || |||||||| || || || || || || || ||||| || || || ||||| ||| | Sbjct 466197 ATTATGCAAATTTTCGTAAAAACCCTAACGGGTAAGACCATCACGCTAGAGGTCGAGCCT 466138 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 ||| || | ||| | || |||||||| |||||||| || || |||||||| || Sbjct 466137 TCTGACCCAATAGAAAACGTTAAAGCTAAAATCCAGGACAAAGAAGGTATTCCTCCCGAT 466078 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 || |||||| | || || || ||||| ||||| || |||| || || | | ||||| Sbjct 466077 CAACAGCGTTTGATCTTCGCGGGTAAACAACTAGAAGATGGGCGCACTCCTTCTGACTAC 466018 Query 27583 AATGTCCAAAAGGAATCCACTCTTCA 27608 ||| ||||||||||||| || ||||| Sbjct 466017 AATATCCAAAAGGAATCAACCCTTCA 465992 >seq365 Length=450407 Score = 136 bits (150), Expect = 5e-27 Identities = 169/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGA---GTCA 27462 ||||| || ||||| || || | || || ||||| || || ||||||||||| |||| Sbjct 426275 ATGCAGATTTTTGTAAAAACTTTGACAGGTAAGACCATCACCCTTGAGGTTGAACCGTCA 426334 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 |||| ||| | ||| | || || || || || ||||| || || || || || || Sbjct 426335 ---GATACCATCGAGAATGTCAAAGCAAAGATCCAAGACAAAGAAGGTATCCCCCCTGAT 426391 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 ||||| ||||||||||| ||||| || || | || |||| |||||| || | |||||| Sbjct 426392 CAGCAACGTCTAATTTTCGCTGGGAAACAGTTAGAAGATGGACGTACCTTATCCGACTAT 426451 Query 27583 AATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || |||||||| || |||||||| || ||| | || || ||||| Sbjct 426452 AACATTCAGAAGGAATCAACGCTTCATCTCGTGTTGAGACTCCGTGGTGG 426501 >seq233 Length=1369072 Score = 118 bits (130), Expect = 1e-21 Identities = 157/216 (73%), Gaps = 4/216 (2%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| | || || || || || || |||||||| || | || || || ||| Sbjct 301581 AATGCAAATTATCGTAAAAACCCTCACGGGAAAGACTATCACGGTAGAAGTCGAATCATC 301522 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGG-ACAAGGAGGGAATTCCTCCAGACC 27523 ||||| || | |||| |||| |||||||| ||| | | |||| ||||||||||| | Sbjct 301521 TGATACTATCGAAAATGTGAAAGCTAAAATCCAGCTATAGGGAG---ATTCCTCCAGATC 301465 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| | || |||||||||||||| ||||| | ||||| || || | | ||||| Sbjct 301464 AGCAACACCTGATTTTTGCTGGTAAACAACTTAAAGATGAACGCACATTGTCTGACTACT 301405 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGC 27619 | |||| || || || ||||||||| | || |||| Sbjct 301404 ACATCCAGAATGACTCTACTCTTCATTTGGTATTGC 301369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570235732110880